Panicum virgatum (switchgrass): 120706085
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Entry
120706085 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML16
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120706085
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Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
Dockerin_1
EF-hand_9
SPARC_Ca_bdg
AIF-1
Motif
Other DBs
NCBI-GeneID:
120706085
NCBI-ProteinID:
XP_039846588
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Position
5K:8226727..8227604
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AA seq
191 aa
AA seq
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MSNGTEKQAQAAAAAQQQRPPAVSAEMQKVFSRFDADGDGRISPSELAAVSRAISPPPSS
SHGGREVAAMMDELDADRDGYVDLGEFAAFHARAAGRGDGELEAELRAAFDVYDVDGDGR
ITAAELGKVLAQIGEGCSAEECERMIASVDGDGDGCVGFEEFKKMMAPQPQGSAADAAAP
GGGLPDKAKKE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggcaccgagaagcaagcccaggcggcggcggcggcccagcagcagaggccc
ccggcggtgtccgcggagatgcagaaggtgttctcccgcttcgacgcggacggcgacggc
cggatctccccctcggagctggccgcggtctcgcgcgccatctccccgccgccgagctcc
tcgcacggcggccgcgaggtggccgccatgatggacgagctcgacgccgaccgcgacggc
tacgtggacctcggcgagttcgcggcgttccacgcgcgcgccgccggccgcggggacggc
gagctcgaggccgagctccgcgccgccttcgacgtctacgacgtcgacggcgacggccgc
atcacggccgccgagctcggcaaggtgctcgcgcagatcggggagggctgcagcgccgag
gagtgcgagcggatgatcgccagcgtcgacggcgacggcgacgggtgcgtcgggttcgag
gagttcaagaagatgatggcgccccaaccccaaggcagcgccgccgacgccgccgcgccc
ggcggcggcctccctgacaaggccaagaaggagtga
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