KEGG   Panicum virgatum (switchgrass): 120706118
Entry
120706118         CDS       T07260                                 
Name
(RefSeq) endonuclease 2-like
  KO
K05986  nuclease S1 [EC:3.1.30.1]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120706118
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.30  Endoribonucleases that are active with either ribo- or deoxyribonucleic acids and produce 5'-phosphomonoesters
    3.1.30.1  Aspergillus nuclease S1
     120706118
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    120706118
SSDB
Motif
Pfam: S1-P1_nuclease
Other DBs
NCBI-GeneID: 120706118
NCBI-ProteinID: XP_039846626
LinkDB
Position
5K:complement(8698878..8702730)
AA seq 304 aa
MAPPPHHHQRTLLLFPLVFLLLLLLAPPRADAWGKEGHIMVCQIAEKYLSEKAAAAVQAL
LPESAGGELSAVCPWADQVRWHYHWSSPLHYVNTPQVCNFKYSRDCHNSRGEQGMCVVGA
INNYTKQLYSYGQKTSYNLTESLMFLAHFVGDVHQPLHVGYEDDEGGNTIVVHWYRRKTN
LHHVWDVSIIDTAIKDFYNKSMDTMVEALKMNLTGGWSDDITRWENCKNKWATCANDYAI
ESIHYSCNYAYKDVEQDITLGDDYFFTRYPVVEKRLAQAGIRLALILNRIFDGDKVDDIP
LQVQ
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcgcccccgccccaccaccaccagcggacgctgctcctgttcccgctcgtcttcctc
ctcctcctcctcctcgcgccgccccgcgccgacgcgtggggcaaggagggccacatcatg
gtctgccagatcgccgagaagtacctgtcggagaaggcggcggcggcggtgcaggcgctg
ctgccggagtcggcgggcggggagctctcggcggtgtgcccgtgggcggaccaggtgcgc
tggcactaccattggtccagccccctccactacgtcaacaccccgcaagtctgcaacttc
aagtattctcgtgattgccacaattctcgtggcgagcaagggatgtgcgtcgtcggggcc
atcaacaactacaccaaacagctctacagctacggccagaagacttcgtataacctgaca
gagagcctcatgttcctggcgcacttcgtcggcgatgtgcaccagcctctgcacgtcggc
tacgaggacgatgagggcgggaacacgatcgtcgtgcactggtaccggaggaaaacaaac
ctccaccacgtgtgggatgtcagcatcatagacacggcaatcaaggacttctacaacaaa
agcatggataccatggtagaggctctcaagatgaaccttaccggtggatggtctgatgac
attacacggtgggaaaattgcaagaacaaatgggcaacctgcgcaaacgactatgccatt
gagagcattcattattcctgcaactacgcctacaaagatgtggagcaagacattactcta
ggagatgattatttcttcactcgatacccggttgtggagaagaggctagcacaggccggc
atcagattagcgttaatacttaaccggatatttgatggggataaagtagatgatatacca
ttacaagtacagtaa

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