Panicum virgatum (switchgrass): 120706125
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Entry
120706125 CDS
T07260
Name
(RefSeq) transcription factor MYB62-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120706125
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120706125
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120706125
NCBI-ProteinID:
XP_039846631
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Position
5K:8790202..8792125
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AA seq
358 aa
AA seq
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MSQRKGAMAAVTSSKHEEEMMELRRGPWTLEEDNLLMNYIACHGEGRWNLLARCSGLKRT
GKSCRLRWLNYLKPDIKRGNLTPEEQLLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWR
TRVQKQARQLRVDANSAVFRDAVRCYWMPRLLEKMAATSAAQQVDPAALLHPAHIAAGVG
GGAASPPVHGGQHDATSAPPGSGYGGHHQSYAVDPSPSTSTSGCSGSTPAAALPPVPCFS
ELSWVVDQYGPYADLDGAGAFDSSALGSLGLDGLDLGPADGDVYPDSTLLDYLNSACTGG
GAMVTMMGGGGNAALSSCGGAIMGGHDGDYGPSSWRTDELCQAAARKLGDHHQWGGGI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaggaaaggggccatggctgcagtgacgagcagcaagcatgaggaggagatg
atggagctcaggagaggcccctggacgctggaggaggacaacctcctcatgaactacatt
gcttgccatggcgagggccgctggaatctcctcgcccgctgctccgggttgaagaggacc
ggaaagagctgccggctccggtggctcaactacctcaagcctgacatcaagcgcggcaat
ctcacgccggaggagcagctcctcatccttgagctccattccaagtggggaaacaggtgg
tcgaggatagcgcagcacctgccggggcggacggacaacgagatcaagaactactggcgg
acgcgggtgcagaagcaggcgcggcagctccgggtggacgccaacagcgccgtcttccgc
gacgccgtccgctgctactggatgccgcgcctgctcgagaagatggccgccacaagcgcg
gcgcaacaggtggatccggcggcgctgctacaccccgcgcacatcgccgccggcgtgggc
ggcggcgccgcctccccgccggtccacggcggccagcacgacgcgactagcgcgccgccg
ggaagcgggtacggcggccaccaccagagctacgccgtcgacccgagcccgagcacgtcg
acgtccggctgctccggctcgacgccggccgccgcgctcccgccggtgccctgcttctcc
gaactgagctgggtcgtcgaccagtacggcccctacgccgacctcgacggcgccggcgcg
ttcgactcctcggcgctggggagcctcggtctggacgggctggacctgggcccggccgac
ggcgacgtctaccccgactccacgctgctggactacctcaactcggcctgcaccggcggc
ggcgccatggtgacgatgatgggcggcggtggcaacgccgccctcagcagctgcggcggc
gccataatgggcggacacgacggcgactacgggccgtcgtcgtggcgcacggacgagctc
tgccaggcggcggcgaggaagctcggcgatcatcatcagtggggaggaggaatctag
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