Panicum virgatum (switchgrass): 120706159
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Entry
120706159 CDS
T07260
Name
(RefSeq) alpha-1,3/1,6-mannosyltransferase ALG2-like
KO
K03843
alpha-1,3/alpha-1,6-mannosyltransferase [EC:
2.4.1.132
2.4.1.257
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
Module
pvir_M00055
N-glycan precursor biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120706159
00513 Various types of N-glycan biosynthesis
120706159
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120706159
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.132 GDP-Man:Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase
120706159
2.4.1.257 GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase
120706159
Glycosyltransferases [BR:
pvir01003
]
N-Glycan biosynthesis
Dol-linked oligosaccharide
120706159
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
GT4-conflict
Flu_NP
Glyco_trans_4_5
Glyco_trans_1_2
Motif
Other DBs
NCBI-GeneID:
120706159
NCBI-ProteinID:
XP_039846671
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Position
5K:9356709..9360530
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AA seq
419 aa
AA seq
DB search
MVAAGGGAGCSSPSVTRARKLKVAVIHPDLGIGGAERLIVDVASQLAAHGYDVHVFTSHH
DKNRCFEETVSGPFLVTVYGDFLPRHVFYRFHAVCAYLRCIFVALCVLLWWPSFDVILVD
QVSVVIPLLKLKASTKIVFYCHFPDLLLAQHTTMLQRLYRKPIDMIEEATTGMANLILVN
SKFTAATFARTFRGLHARGIEPRVLYPVVSAEQFHEPHSYKLNFLSINRFERKKNLDLAI
SAFALLRSVASKLPGDALQDATLTVAGGYDKRLKENVDYLEELKRLAVTEGVSGQVKFVT
SCSTSERNELLSNCLCVLYTPKDEHFGIVPLEAMAAHKPVITCNSGGPVETVVNEVTGFL
CDPSPTEFSKAMLKLVNDHDLAIRMGKQARDHVVQKFSTKTFGGLLNSYVLNVYHERME
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggcgggcggaggtgccggctgctcgtcgccatcagtaacaagggcaagaaag
cttaaagtcgctgttatccatccagatctaggaatcggtggcgctgagagattgattgtt
gatgtggcttctcagcttgctgcccatggatacgatgttcatgttttcacatcacaccat
gataagaaccgttgctttgaggagaccgtttctggcccttttctggttactgtatatgga
gatttcttgcctcgccatgtattttaccgctttcatgctgtctgcgcttatcttcgctgc
atttttgttgcgctctgtgtgctactctggtggccctcatttgatgtcatattggttgac
caagtttctgttgtgattccactgctcaaactgaaggcatcaaccaagatagttttttat
tgtcatttcccagatcttttgcttgcacaacatactaccatgcttcagaggttataccgc
aagccaattgacatgattgaggaggccactactggtatggcaaatttaattttggtcaac
agcaaattcactgcggcaacctttgcgaggacctttcgtggcttacatgctagaggaatt
gagcctcgtgttctatatccagttgtatctgctgagcaatttcatgaacctcattcttat
aagttgaatttcctatcaatcaaccgttttgagaggaaaaagaatcttgatctagccatt
tcagcatttgcgttgctccgttctgttgcttctaaactacctggtgatgctttgcaagat
gcaactttaacagtagcaggtggctatgataagcgtctcaaggaaaatgttgattacctt
gaggagctcaaaagattggcagtgactgaaggggtgtctggacaggttaaatttgtaacg
tcgtgctcaacatcagaaagaaatgagcttctctccaactgcctttgtgttttgtacact
ccaaaggatgagcattttggcattgtccctcttgaagccatggcagcccataaaccagta
attacatgcaacagtggtggcccagtggaaaccgttgtgaatgaagttacagggtttctg
tgtgatccatcccccacagaattctcaaaagccatgctgaaacttgtgaatgatcatgat
cttgcgatcaggatgggtaaacaagcacgggaccatgtggtgcaaaaattctccacgaag
acatttggtggcctcctcaacagctatgtcctgaatgtctaccacgagaggatggagtga
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