Panicum virgatum (switchgrass): 120706183
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Entry
120706183 CDS
T07260
Name
(RefSeq) LRR receptor kinase SERK2-like
KO
K13418
somatic embryogenesis receptor kinase 1 [EC:
2.7.10.1
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120706183
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120706183
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120706183
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: TKL group
IRAK family
120706183
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_1
LRR_14
LRR_4
LRRNT_2
LRR_8
ABC1
LRR_LRWD1
APH
LRR_R13L1-DRL21
Pkinase_fungal
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
120706183
NCBI-ProteinID:
XP_039846703
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Position
1K:complement(38314585..38321026)
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AA seq
626 aa
AA seq
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MAAAAAVRWWAAVALAVAVALGPGRVVANTEGDALYSLRQSLRDANNVLQSWDPTLVNPC
TWFHVTCNNDNSVIRVDLGNAQLSGVLVPQLGQLKNLQYLELYSNNISGTIPPELGNLTN
LVSLDLYMNNFSGNIPDSLGNLLKLRFLRLNNNSLVDKIPESLTNISTLQVLDLSNNNLS
GPVPSTGSFSLFTPISFANNPLLCGPAASKPCPGAPPFSPPPPYNPPSPPTPSTGASSTG
AIAGGVAAGAALVFAVPAIAFAMWRRRKPEEHFFDVPAEEDPEVHLGQLKKFSLRELQVA
TDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN
LLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPSEPPLDWETRRRIALGSARGLSYLH
DHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS
TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKVEMLVDPD
LQNAYQETEVENLIQVALLCTQGSPLDRPKMSEVVRMLEGDGLAERWDEWQKVEVVRQEA
ESAPLRNDWIVDSTYNLRAVELSGPR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggtgaggtggtgggcggcggtggcgctcgcggtggcggtggcg
ctcgggccggggcgggtcgtcgccaacaccgagggtgatgctctgtacagcctgcggcag
agcttgagagatgctaacaatgtcttgcagagttgggatcccactcttgttaatccctgt
acatggttccatgttacgtgtaacaatgataacagtgttatcagagttgaccttggaaat
gcacaattatcaggtgtactagtcccccagcttggtcagctgaaaaatctccaatatttg
gagctttacagcaacaacataagtgggacaataccccctgaactgggcaacctaactaac
ctggtcagtttggatctgtatatgaacaacttctctggcaatatcccggacagccttgga
aacctattgaagctgcgtttcctccgtcttaacaacaacagcttggttgataaaattcct
gaatccttgaccaatatctccactctccaagtactggatctttcgaacaacaacctctca
ggacctgtcccatcgactggttccttttcactcttcactcctataagttttgccaacaat
ccattgctctgtggtcctgctgcttcaaagccctgccctggggctcctcctttttcccca
ccacctccgtataaccctccatcgcctccaaccccatcaacaggtgcctctagcactgga
gcaattgctggaggtgttgctgctggcgctgcattggtatttgctgttcctgcaattgcg
tttgcaatgtggcgccgtcgtaaaccggaagagcatttctttgatgtgcctgctgaggag
gatccagaagttcatcttggtcagctcaaaaagttttcattgcgggagcttcaagttgca
actgataatttcagcaataagaacattttaggaagaggtggttttggaaaagtgtacaag
ggaaggctcgctgatggttcattggtagcagtcaaaagattaaaggaggagcgtacacct
ggtggtgagcttcagttccaaacagaggttgagatgattagcatggcagtgcacagaaac
cttctccggcttcgcggtttctgcatgacacctactgagcgattgctagtctacccatac
atggctaatgggagtgtggcatcacgtttacgagagcgccaaccatctgaaccacctctt
gactgggagacaaggagacggattgcactgggatctgcaagaggactctcttacttgcac
gaccactgtgatccaaaaatcatccatcgtgatgtcaaagctgcgaatattcttttggac
gaggacttcgaggcagttgtgggtgattttgggcttgccaagcttatggactacaaggat
acccatgtaactactgctgttcgtggaacaattggacatattgctcccgagtacctttcc
acggggaagtcctctgagaagactgatgtttttggctatgggatcatgcttctggagctt
attactggacagagggcattcgatcttgctcgtcttgcaaatgatgatgatgttatgctg
cttgactgggtgaaaggactgctcaaggagaagaaggtcgagatgttggtggacccagac
ctgcagaacgcctaccaggagaccgaggtggagaacctgatccaggtggcgctcctctgc
acacagggttccccattggaccgacccaagatgtcagaggtggtgaggatgctggaaggc
gacggcctggcggagcgatgggacgagtggcagaaggtggaggtggtgaggcaggaggct
gagtcggcgccgctccgcaacgactggatcgttgattcaacatataacctgcgggctgtg
gagctgtccggcccaaggtga
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