Panicum virgatum (switchgrass): 120706230
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Entry
120706230 CDS
T07260
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic-like
KO
K03768
peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120706230
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120706230
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120706230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
120706230
NCBI-ProteinID:
XP_039846746
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Position
5K:10404872..10406118
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AA seq
315 aa
AA seq
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MPGMPCQPEQSKMSQRILNTAKPTPAPTQRHHPSPPPKLGRRAASAAIAIAAAPALRAVS
PASSRAQEVEPEAVGVAGAATAAATVAAPCLAELPVTATAFLDVSIGGEPAGRITVGLFG
DAAPAGASRFLSLVTGVGYRRKEFVKIVPGYVQHGGVVSYPAVSAVTDRLAAEADALRAR
CPGGGAVHGAAGAVSIVVRDPSLPPPKPKLVARGGKLEVEEEQAGVAPNGTEFVITTGAA
PELDAAAVLVGRVLDGMDVVAKIAAVPTVRDNAASPYFRVAKLIGDKRAVVAERGFNRPY
TKVVVSNCGVLSKTE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcatgccgtgccagcctgagcaaagcaaaatgtcgcagcgaatcctcaacact
gccaagccgacgccagcgccgacccagcgccaccacccttcgccgccgcctaagctcggc
cgccgcgcggcctctgcggcgatcgccatcgcggccgcgccggcgctccgggccgtctcg
ccggcgtcgtccagggcgcaggaagtcgaacccgaagccgttggcgtcgccggtgccgcg
accgccgccgccaccgtggcggcgccgtgcctcgcggagctgcctgtcaccgcgacggcc
ttcctggacgtgtccataggcggggagcccgcggggcgcatcacggtgggcctgttcggc
gacgcggccccggcgggcgcgtcccggttcctgtccctcgtcacgggggtcgggtaccgg
cgcaaggagttcgtcaagatcgtgccgggctacgtgcagcacggcggcgtggtgtcgtac
ccggccgtctccgcggtgacggaccggctggcggccgaggcggacgccctgcgcgcgcgg
tgccccggcggcggcgccgtgcacggcgcggcgggcgcggtgtcgatcgtggtgcgggac
ccgagcctgccgccgccgaagccgaagctggtggcccggggcgggaagctggaggtggag
gaggagcaggcgggcgtggcgcccaacggcaccgagttcgtgatcaccaccggcgcggcg
cccgagctggacgcggccgcggtgctggtgggcagggtgctggacggcatggacgtcgtc
gccaagatcgctgccgtgcccaccgtcagggacaacgccgcctcgccctactttagagtg
gccaagctgatcggtgacaagagagcagtggttgcagagagaggattcaaccgtccgtac
accaaggtcgtcgtctccaactgcggcgtgctaagtaaaacggagtaa
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