Panicum virgatum (switchgrass): 120706290
Help
Entry
120706290 CDS
T07260
Name
(RefSeq) probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
KO
K01824
cholestenol Delta-isomerase [EC:
5.3.3.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00100
Steroid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120706290
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.5 cholestenol Delta-isomerase
120706290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EBP
Motif
Other DBs
NCBI-GeneID:
120706290
NCBI-ProteinID:
XP_039846837
LinkDB
All DBs
Position
5K:11208315..11209986
Genome browser
AA seq
220 aa
AA seq
DB search
MAGGHGHPYSPAELELPGFVPQRLSPGEILAPFLGASLLVALAVWLISGRCGGGGSPRTD
RLLMCWWAFTGLTHILLAGAFLLAPGFFSRESPNYFDELFKEFSKGDSRYAARDTAILAL
EVVTIGFKGPASLLAVYAIASRKSYSHILQFAVSLSQLYGCLFYFVTAYLAGFNFWASPF
YFWAYFVGANISWVVVPTLVAARSWKKISAAFRAEKVKIR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgggcacggccacccttactcgccggcggagctggagctgccggggttcgtg
ccgcagcggctgtcgccgggcgagatcctcgcgccgttcctgggcgcctccctcctcgtc
gccctcgccgtctggctcatctccgggagatgcggcggcggcggatcgcccaggaccgac
cgcttgctcatgtgctggtgggcgttcaccgggctgacccacatcctcctcgcgggggct
ttcctcctcgcccccggtttcttcagcagggagagccccaattacttcgacgaactcttt
aaggagttcagcaagggtgactccaggtacgccgccagggacaccgcgatcctcgcgctc
gaagtggtaacgatcgggttcaaaggccctgcatccctgctcgcagtctatgcaattgca
tccaggaagtcttacagccacatcctacagttcgccgttagcttgagccagctctacgga
tgcttgttctacttcgtcaccgcgtacttggctggcttcaacttctgggccagtccattc
tacttctgggcgtatttcgtcggcgcaaacatctcgtgggttgtcgtaccaacgctcgtt
gcggcaaggagctggaagaagatctccgcagcatttcgagctgagaaggtgaagatcaga
tga
DBGET
integrated database retrieval system
