Panicum virgatum (switchgrass): 120706297
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Entry
120706297 CDS
T07260
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1-like isoform X1
KO
K12198
charged multivesicular body protein 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120706297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120706297
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
120706297
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Gene cluster
GFIT
Motif
Pfam:
Snf7
Prefoldin
Laminin_I
COG6_N
SOAR
Motif
Other DBs
NCBI-GeneID:
120706297
NCBI-ProteinID:
XP_039846844
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Position
5K:11261600..11264151
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AA seq
230 aa
AA seq
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MKKIFGAKKDKGPPPSIQDATERINKRGETVDEKIKKLDEELARYKEQIRRTRPGPSQEA
IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMM
KTVKIEDIDNMQDEMTDLMDVSNEIQETLGRSYNIPDDVDEEELMGELDALESDMEFESA
AVPSYLQPEPDFDADLNLPAAPTRPAAVPAGGQQEDELGLPAVPRASLRS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcttcggcgccaagaaggacaagggcccgcccccatccatccaggacgcc
accgagcggataaacaagcggggcgagacggtggacgagaagatcaagaagctggacgag
gagctggccaggtacaaggagcagatccgcaggacccgccccggcccgtcccaggaagcc
atcaaggcgcgcgccatccggctcctcaagcacaagcgcatgtacgaggagcaacgcaac
atgttgtacaaccaaacctacaatctcgaccaagttgccttcgctgccgatggcctcaag
gacgctcagcagactatgaatgcgatgaaggcggcgaacaaggagctcaagggaatgatg
aaaacggtcaagattgaggacattgataatatgcaagatgaaatgacggatctgatggac
gtgagcaatgagatacaagaaactcttggtagaagctacaacatccctgatgacgttgat
gaggaagaactgatgggggagctggatgctttggagtctgatatggagttcgagtcagct
gcagttccgtcgtaccttcaacctgaacctgattttgatgctgacctcaacttacctgct
gcaccgacacgccctgcagcagtcccagcaggcggacaacaggaggatgaactaggatta
ccagcggtgcctcgagcatcgcttcgcagttag
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