Panicum virgatum (switchgrass): 120706346
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Entry
120706346 CDS
T07260
Name
(RefSeq) T-complex protein 1 subunit beta-like
KO
K09494
T-complex protein 1 subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120706346
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120706346
04147 Exosome [BR:
pvir04147
]
120706346
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP60 / Chaperonin
120706346
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
BBS-CCT complex
120706346
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120706346
Exosomal proteins of colorectal cancer cells
120706346
Exosomal proteins of bladder cancer cells
120706346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120706346
NCBI-ProteinID:
XP_039846896
LinkDB
All DBs
Position
5K:11735651..11740535
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AA seq
525 aa
AA seq
DB search
MERVLKGDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDG
ATILKSLHIDSPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTII
AGFRMAAECARNALLQRTMDNKENTDKFRADLMNIAMTTLSSKILSQDKEYFAELAVDAV
LRLKGSTNLEAIQILKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD
KVKIYGARVRVDSMSKVADIEAAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA
GILAIEHADFEGIERLALVTGGEIASTFDNPESVKLGHCKVIEEIMIGEDRLIHFSGVEM
GQACTIVLRGASEHVLDEAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKEVDELARK
TPGKKSHAIEAFSRALQAIPTTIADNAGLDSAELISQLRAEHHKDNSTAGIDVITGSVGD
MQKLGIQESFKVKQAILLSATEAAEMILRVDEIITCAPRRREDRM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtgctcaagggtgacgccgtcgaggagaagggcgagcgcgcccggatggca
gcttttatcggagccatggcaattgcggatttggtcaagaccacattgggaccaaaagga
atggataagatcttgcaatcaactggcagaggccggagtgttactgttacaaatgatggg
gctaccattttgaagtcgcttcacattgacagtcctgccgcgaaggtccttgttgacata
tcgaaagttcaagatgatgaagttggtgatggaacaacttctgttgttgttttggctgga
gagcttttgagggaggctgagaagttggttaacatgaagattcatcccatgactattatt
gcaggtttcagaatggcagctgagtgtgctagaaatgctttgctacaaaggaccatggac
aacaaagaaaatacagataagttcagagctgatctcatgaacattgctatgactaccctt
agttcaaaaattctttcccaggacaaggagtactttgctgaacttgcagttgatgctgta
ttaaggcttaagggtagcaccaacctggaagccattcaaattctgaagaaacctggagga
tctcttaaggactcctttttggatgaagggttcattcttgacaagaaaattggcattggg
caacctaagagaattgaaaatgccaaaattttggtcgcaaacactgctatggacacagat
aaagttaagatctacggggcacgtgtccgggtggattcaatgtctaaggttgcagatatt
gaagctgctgaaaagcagaaaatgagagagaaggtgcagaagattatagcacatgggatc
aactgttttgtcaacaggcaattaatctataacttccctgaagaactctttgctgatgct
ggtatacttgcaattgagcatgctgattttgagggcattgaacggctagctcttgtcact
ggtggtgagatcgcatcgacttttgataatccggagtctgttaagcttgggcactgcaag
gttattgaagagattatgatcggggaggacaggctaattcatttctctggggttgagatg
ggacaggcttgcaccattgtcctgcggggagcgagtgagcatgtgcttgatgaggctgag
aggtccttgcatgacgccctatgcgtgctgtcccagacagtgaacgacacccgtgtcttg
ttcgggggtggatggcctgaaatggtgatggccaaagaagtcgatgaacttgcaaggaag
acccctgggaagaaatctcatgctatcgaggctttctcccgtgccctgcaagccatccca
acgaccatagctgacaatgctggtttggatagtgctgagctcatctctcagctccgggct
gagcaccacaaggacaacagcactgctggaattgatgtcatcacgggcagcgttggagac
atgcagaagctggggattcaagagtctttcaaggtgaagcaggccatccttctgtccgcg
acggaggcggcagagatgatcctcagggtcgacgagatcataacctgcgccccgcgcaga
agagaggacaggatgtga
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