Panicum virgatum (switchgrass): 120706363
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Entry
120706363 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 27
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120706363
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120706363
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GFIT
Motif
Pfam:
K-box
SRF-TF
Stn1
bZIP_1
DUF7121
GW
ResIII
Laminin_II
Motif
Other DBs
NCBI-GeneID:
120706363
NCBI-ProteinID:
XP_039846929
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Position
1K:38616546..38625738
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AA seq
240 aa
AA seq
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MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELSILCDAEVGLMIFSSTGRLYEYSST
SMKSVIDRYGKAKEEQQVVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV
KELQSLENQLETSLRGVRAKKDHLLIDEIHELNRKASLFHQENMDLYNKINQIRQENSEL
YKKIYQTEGPSEVNQESPTPYNFAVVENTDVPVQLGLSTLPQQNSIEPSTAPKLGLQLNP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggaaagattgtgatccgcaggatcgacaactccacgagcaggcaggtgacc
ttctccaagcgccggaacgggatcttcaagaaggctaaggagctctctatcctctgtgat
gccgaggtcggcctcatgattttctccagcaccggccgcctctacgagtactctagcacc
agcatgaaatcagtgatagatcggtatggcaaggccaaggaagagcagcaggttgtcgca
aatcccaactcagagcttaagttttggcaaagggaggcagcaagcttgagacaacaactg
cacaacttgcaagaaaatcataggcagttgatgggagaggatctttctgggcttaatgtt
aaggaactgcagtccctagagaatcagttggaaacaagcctgcgtggagtccgcgcaaag
aaggaccatctcttgattgatgaaattcacgaattgaatcggaaggctagtttatttcat
caagaaaacatggacttgtacaataagatcaaccagattcgtcaagaaaattccgagtta
tataagaagatctatcagaccgaaggaccaagtgaagttaatcaggaatcaccgactcca
tacaactttgcagtagtagaaaacacagatgttcctgtgcaacttggactcagcacactg
ccacaacagaacagcatcgagccgtcgactgctccaaagctcggattgcagttaaatcca
tga
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