Panicum virgatum (switchgrass): 120706364
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Entry
120706364 CDS
T07260
Name
(RefSeq) importin subunit alpha-1a
KO
K15042
importin subunit alpha-6/7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120706364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120706364
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120706364
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
IBB
ARM_ARMC5
HEAT_2
Arm_3
HEAT
ZER1-like_2nd
V-ATPase_H_C
Adaptin_N
ARM_LRRK2
DUF4704
Motif
Other DBs
NCBI-GeneID:
120706364
NCBI-ProteinID:
XP_039846926
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Position
5K:11946588..11952509
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AA seq
527 aa
AA seq
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MSLRPSERVEVRRNRYKVAVDAEEGRRRREDNMVELRKNRREESLLKKRREGLQAQVPVP
ASGVEKKLESLPAMVSGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQF
LTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLQSASDDVREQAVWALG
NVAGDSPKCRDLVLANGALMPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPSFDQTKPA
LPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIP
ALRTVGNIVTGDDLQTQCIIDHQALPCLLNLLTQNHKKSIKKEACWTISNITAGNKDQIQ
AVISGGIIAPLLHLLQTAEFDIKKEAAWAISNATSGGSHEQIKYLVSEGCIKPLCDLLVC
PDPRIVTVCLEGLENILKVGEHDKAAGATGDINVFAQMIDEAEGLEKIENLQSHDNNEIY
EKAVKLLEAYWMEEEDEAMATAGEAAPAVFDFGQGGNPPAGGGLNFN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcgcccgagcgagcgggtcgaggtgcggcggaaccgctacaaggtggcggtg
gacgcggaggaggggcggcggcggcgcgaggacaacatggtggagctccgcaagaaccgc
cgcgaggagagcctcctcaagaagcgccgcgaggggctccaggcccaggtccccgtcccc
gcctccggggtcgagaagaagcttgaaagcctcccagctatggttagtggggtttattcg
gacgacaacaaccttcagcttgaggccacaacacaattccgcaagttgctctccatagag
aggagccccccgattgaggaagttattcagtcaggtgttgttcctagatttgtgcagttc
ctcaccagagaggatttccctcaactgcagtttgaagcagcatgggcacttacaaatatt
gcttctggcacttcggaaaatacgaaggttgtcattgatcatggggctgttccgatattt
gtgaaacttcttcagtctgctagtgatgatgttcgtgagcaggctgtatgggctttgggc
aatgttgctggtgattctccaaagtgccgcgaccttgttctcgccaatggtgccttgatg
cctctgctagcccagttaaatgagcatgctaagctctccatgttgaggaatgctacatgg
actctgtcaaacttctgcaggggaaagccgcagccatcatttgatcagactaagcctgct
cttccagcacttgcacgacttatccactccaatgatgaggaagttctcactgatgcatgc
tgggctctttcatacttatctgatggcactaatgacaaaatccaagctgtgattgaagct
ggtgtgtgtccccgccttgtggagctcctcctccatccatcaccttcggtgcttatacct
gctctacgaactgttggaaacattgtcactggagatgatttgcaaactcagtgcatcatt
gatcatcaagctcttccctgccttctgaatctattgacacagaaccataagaaaagtatt
aagaaagaggcttgctggacaatttcaaatattactgctggaaacaaagatcagatacag
gctgtgattagtggtggaattatcgctcctttattgcatctactccaaacagcagagttt
gatattaagaaagaggctgcttgggctatctcaaatgctacctcaggtggttcccacgag
caaatcaagtatttggtgtctgagggctgcatcaagccattgtgcgaccttcttgtttgc
cctgatccaagaattgtaacagtgtgtttggagggtcttgagaatattctcaaagtgggt
gagcatgacaaggccgcaggtgcaacaggtgacatcaatgtctttgctcagatgatcgat
gaagctgaaggcctggagaagattgagaacctacagagccatgataacaatgaaatctat
gaaaaggctgtgaagcttcttgaggcatactggatggaggaggaagatgaggcaatggct
actgctggggaagctgctcctgctgtttttgactttggccaaggtggcaaccctcccgct
ggtggtggtttgaacttcaattaa
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