KEGG   Panicum virgatum (switchgrass): 120706370
Entry
120706370         CDS       T07260                                 
Name
(RefSeq) replication protein A 14 kDa subunit-like
  KO
K10740  replication factor A3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03420  Nucleotide excision repair
pvir03430  Mismatch repair
pvir03440  Homologous recombination
pvir03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120706370
   03420 Nucleotide excision repair
    120706370
   03430 Mismatch repair
    120706370
   03440 Homologous recombination
    120706370
   03460 Fanconi anemia pathway
    120706370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120706370
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120706370
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    120706370
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     120706370
   MMR (mismatch excision repair)
     120706370
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     120706370
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 120706370
NCBI-ProteinID: XP_039846934
LinkDB
Position
5K:complement(12112947..12115354)
AA seq 106 aa
MDTSSPAAFVNGENLKMFVGRRVRTVVQVQRIEGGMVVGQSTDGRPLTIKSAMNIPVSHF
MEVYGIAENDQTIRAEVCTDFGPNFDAKAFEGLCKLASDKFKHLFL
NT seq 321 nt   +upstreamnt  +downstreamnt
atggacacatcaagccccgcagcattcgtcaatggagagaatctgaaaatgtttgtgggg
cgaagagtgcgcacggtggtccaagtccaacgcatcgaaggtggaatggttgtcgggcag
tccactgacgggcgcccgttgactatcaaaagtgccatgaacattcctgtatcgcacttc
atggaggtttatggaattgctgaaaatgaccagaccatccgcgctgaagtctgcacagat
tttggtcccaactttgatgccaaggcatttgaagggttgtgcaagctcgcaagtgacaag
ttcaagcacctgttcctgtag

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