Panicum virgatum (switchgrass): 120706372
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Entry
120706372 CDS
T07260
Name
(RefSeq) GTP-binding protein SAR1A-like
KO
K07953
GTP-binding protein SAR1 [EC:3.6.5.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120706372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120706372
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pvir04031
]
120706372
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120706372
GTP-binding proteins [BR:
pvir04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Sar
120706372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
G-alpha
Roc
SRPRB
MMR_HSR1
Ras
Gtr1_RagA
PduV-EutP
RXYLT1_N
Aerolysin
Motif
Other DBs
NCBI-GeneID:
120706372
NCBI-ProteinID:
XP_039846936
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All DBs
Position
5K:complement(12139059..12143557)
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AA seq
193 aa
AA seq
DB search
MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAVDKERFAESKKELDALLADDSLA
NVPFLILGNKIDIPYAASEEELRYYLGLSNFTTGKGNVNLSDSNVRPLEIFMCSVVRKMG
YGEGFKWMSQYIK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgttcctggtggactggttctacggggtgctggcgtcgctggggctgtggcagaaggag
gccaagatcctcttcctcggcctcgacaacgccggcaagaccaccctcctccacatgctc
aaggacgagcggctcgtacagcaccagccgacgcagtaccccacgtcggaggagctgagc
atcggcaagatcaagttcaaggccttcgacctcggcggccaccagatcgctcgccgcgtc
tggaaggactactacgccaaggtggatgctgtcgtgtacttggtggatgctgttgacaag
gaacggtttgccgagtcgaagaaggagcttgatgctcttcttgcagatgactcacttgcg
aacgttcctttcctcatactgggcaataagattgacattccgtacgcagcttcagaggag
gagctgcggtactacctcgggctgagcaacttcacaaccgggaagggcaacgtgaacttg
tctgactccaatgttcgccccctggagatcttcatgtgcagtgtggtgcgcaagatgggc
tacggcgaaggcttcaaatggatgtctcagtacatcaagtga
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