Panicum virgatum (switchgrass): 120706438
Help
Entry
120706438 CDS
T07260
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 27-like
KO
K15170
mediator of RNA polymerase II transcription subunit 27
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120706438
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120706438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med27
Motif
Other DBs
NCBI-GeneID:
120706438
NCBI-ProteinID:
XP_039847028
LinkDB
All DBs
Position
5K:12998488..13002816
Genome browser
AA seq
414 aa
AA seq
DB search
MQQPQGQAAALAVVPSASAVAHPNDPAGGDAPPKQVAQAMERLGRAGRLIAEIRLGADRI
LEALFVAGGAPPYSAPQHIDRTSRAIVQEEAAMRRHFQDLRALGRQLEESGVLNGALKAR
GNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDEV
LSHLHDGEPGVTKKPRLSTSNGELGEESLSEILKNLENEVPNMKIFTYRHLDWSKRASSL
ASLMDDEFVDPSKELNLENLGKLRSSALTTSIDQVAVIELLVPSIFRAIVSLHPAGSTDP
DAVAFFSTTEGGSYLHARGTSMHHVFKHVKEHSDKALQYFVSVEPSKALSLLLRWIASYQ
TLFTKVCSKCRRLLMMDKSLALLLPPVHRPYHQTSNVGPDLQEAYHIGCSSYEG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctcaggggcaggcggcggcgctcgcggtggtgccgtcggcgtcggcggtg
gcccacccgaacgatccggcagggggagacgcgccgccgaagcaggtcgcgcaggcgatg
gagcgtctggggcgtgcggggcggctcatcgcggaaatccggctcggcgcggaccgcatc
ctcgaggccctcttcgtcgccggcggcgcgcccccttatagcgcgccccagcacatcgac
aggacatcgcgcgctatcgtccaggaggaggccgccatgcgtcgccacttccaggacctc
cgcgcgctcggcaggcaattagaggagtctggagttcttaatggggcccttaaagctcga
ggaaattcatggggcttgcacatgccacttgtttgtccagatggtgctgttgtagcttat
gcttggaagcgtcaactggcaggtcaggctggtgcatctgctgtggacagaactaggtta
gctttaaaggccttcactgaccagaaaagaagattctttcctcatctagaagatgaagtc
cttagccatctccatgatggtgagcctggtgtcaccaaaaagccaaggttgtctaccagt
aatggagaacttggggaagaatctttatctgaaatactgaaaaatctggaaaatgaagtg
cctaacatgaaaatattcacataccggcatctggattggtctaaaagagcttcgtcatta
gcatctctgatggatgatgagtttgtggatccatctaaagagttgaacctggaaaatttg
ggtaaattgagatccagtgctctgacaacttccattgaccaggttgcagtgattgagttg
ttggttccttcaatatttcgagctatagtgtcattgcaccctgctggatctactgatcct
gatgcagtggctttcttctctaccaccgagggaggaagctaccttcacgcaagaggcacg
tcaatgcatcatgtctttaagcatgtaaaggagcattctgacaaggcattgcagtacttt
gtcagtgtggagcccagtaaagcactatctctgcttttgcgttggattgccagctatcag
actctgtttacaaaggtttgcagcaaatgcagacggcttctgatgatggacaaatccttg
gctttgcttttgccaccagtgcaccgcccatatcaccagacttcaaatgttggcccagat
cttcaggaggcgtatcacattggatgttcttcctatgaaggctag
DBGET
integrated database retrieval system
