Panicum virgatum (switchgrass): 120706543
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Entry
120706543 CDS
T07260
Name
(RefSeq) presenilin-like protein At1g08700
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120706543
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A22: presenilin family
120706543
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Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
120706543
NCBI-ProteinID:
XP_039847155
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Position
5K:complement(14656457..14658372)
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AA seq
481 aa
AA seq
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MDLAAASPAPEPAAEEPPSASSVLDSLGAEVLAVMSPVSICMALVVLLISLLAPPSSGSA
GASPPPVTAATLVYLESPSDTPGQKLLGALLDAAVFVALVAAVTFVLVALYYYRCTGFLK
NYMRFSAFFVIFSMGGAIAAAVLRRLAAPLDAPTAFLLLFNGAAVGVLSVFASAVPILVR
QGYMVALAVIVAAWLSRLPEWTTWIMLVALALYDLVAVLAPRGPLRMLVELASSRDDELP
ALVYESRPTVGLATSSSSYASAMGSVEMQTMTDSGRAGGSRYDRVEQDEHASSAVVEMRD
LGRGRSSIGEMNRSRGSVLQMDNLEREVPVTSAKLPSNEGGSSQHAVIQIEQHGEEETAP
LVSAASTNNAASDEEHRQSSSSEPLDFEMFESTRGIKLGLGDFVFYSVLVGRAAMYDLMT
VYACYLAIIAGLGCTLILLSICRHALPALPISIMLGVTFYFLTRLLMEPFVVGASTNLVM
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgccgccgcctcaccggcgccggagcccgccgcggaggagccgcctagcgcc
tcctccgtgctcgacagcctcggcgcggaggtgctggcggtcatgtccccggtctccatc
tgcatggccctcgtcgtgctcctcatctccctcctcgcgccgccgtcctccgggtccgcg
ggggcctcgcctccgccggtcaccgcggcgacgctcgtctacctcgagtcccccagcgac
accccgggccagaagctcctcggcgcgctcctcgatgccgcggtcttcgtcgccctcgtc
gccgccgtcaccttcgtcctcgtcgcgctctactactaccgctgcacgggcttcctcaag
aactacatgcgcttctccgccttcttcgtcatcttctccatgggcggcgccatcgccgcc
gcggtgctccgccgcctcgcggccccgctcgacgcgccaaccgcgttcctgctcctcttc
aacggcgccgcggtcggcgtcctctctgtcttcgcgtccgccgttcccatcctcgtccgc
caggggtatatggtcgcgctcgccgtcatcgtcgccgcctggctctccaggcttcccgag
tggaccacatggatcatgctcgtcgccctcgccctgtacgacctcgtcgccgtcctcgcg
ccgcggggaccactcaggatgcttgtggagctggcctcctccagggatgacgagctccca
gcgctcgtctacgagtcccggcctacagtcggcctggcgacaagttcttcctcttatgct
tcggccatggggtcggtggagatgcagaccatgacagattctggtcgggctggtggtagc
cggtatgacagggtggagcaggatgaacatgccagtagtgctgttgtggagatgagggat
cttggaagaggccgatcaagcattggtgagatgaacagatcaagaggttctgtgcttcaa
atggataaccttgaaagggaggttccagtgacttcagcgaagctgccatcaaatgagggt
gggagttcacagcatgccgtcattcaaattgaacagcatggggaagaagagacagcgcct
cttgtgtcggcagcatctaccaacaatgcagcttcagatgaggagcatagacaaagttca
tcctcggagcctctggattttgagatgtttgaatctaccaggggcatcaagctgggcctt
ggtgattttgttttctacagtgtgcttgttgggagagctgctatgtatgatctgatgact
gtgtatgcatgctaccttgccatcattgctggactcggctgcaccctaatcttgctgtcg
atatgccggcatgcactgcctgcactcccgatatctattatgctcggagtgacattctac
ttcttgacgcggttgctgatggagccatttgtggttggtgcctccacaaacttggtgatg
ttctga
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