Panicum virgatum (switchgrass): 120706557
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Entry
120706557 CDS
T07260
Name
(RefSeq) COP9 signalosome complex subunit 2 isoform X1
KO
K12176
COP9 signalosome complex subunit 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120706557
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
120706557
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GFIT
Motif
Pfam:
PCI
Transglut_i_TM
Motif
Other DBs
NCBI-GeneID:
120706557
NCBI-ProteinID:
XP_039847170
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Position
5K:complement(14784635..14794972)
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AA seq
439 aa
AA seq
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MGSDADMEDYGFEYSDEEPEEQDVDIENQYYNSKGMVETDPEGALAGFDQVVKMEPEKAE
WGFKALKQTVKLYYKLGKYKEMMDAYREMLTYIKSAVTRNYSEKCINNIMDFVSGSASQN
FSLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDMGEYGRMSKILKELHKSCQREDG
SDDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKM
HMAERQWAEAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN
DPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIK
PYTRIRIPFISQELNVPEKDVEQLLVSLILDNRIQGHIDQVNKLLERGDRSKGMRKYNAI
DKWNSQLKSIYQTVSNRVG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgatgcggacatggaggactacgggttcgagtactcggacgaggagccggag
gagcaggatgtcgacatcgagaaccagtactacaactccaaaggtatggttgagacagac
ccagagggtgcacttgctggttttgatcaagtagtcaaaatggagccagaaaaggctgaa
tggggatttaaagctcttaagcaaactgtcaagctttactataagctggggaaatacaaa
gaaatgatggatgcctacagggagatgttaacatacataaagtctgctgtgacccgaaac
tacagtgagaaatgtataaacaacataatggattttgtttctggatctgctagtcagaac
ttttctcttttacaagagttctaccagacaacactgaaagctcttgaagaagcaaaaaat
gagagattatggttcaagacaaacctgaagctttgcaaaatttggtttgatatgggggag
tatggccgcatgagcaagatactgaaggagctgcataaatcttgtcaaagggaagatggt
tctgatgaccaaaagaaaggcacacagcttttggaagtctatgctattgaaatccaaatg
tacaccgaaacaaagaataataaaaagcttaaggaattgtatcagagggctctttcaatc
aaatcagcaatacctcatccaagaatcatgggtataattcgtgaatgtggtggtaagatg
cacatggctgagaggcagtgggcagaagctgcgactgatttctttgaagctttcaagaac
tacgatgaagcaggcaatccgcggagaattcaatgcctcaaatatctcgtccttgccaat
atgttgatggaatctgaagtgaatccctttgatggacaagaggccaagccgtacaaaaat
gatcctgaaatccttgcaatgacaaacttgattgcagcgtaccagaagaatgacatcatg
gaatttgaaaagatcctaaagagtaatagaaggacaataatggatgatcctttcatccgt
aactatattgaggacctgttgaagaacatcagaactcaagtcctgctcaagcttattaag
ccatatacacggatcaggataccattcatttcacaggaactcaatgtccccgaaaaggat
gtcgagcagctgttggtatccctgattctggacaaccggatccagggccacatagatcag
gtgaacaagctgctagaacgtggagacaggtccaaggggatgaggaagtacaatgccata
gacaagtggaatagccagcttaagtcaatataccaaacggtgtccaacagagttgggtga
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