Panicum virgatum (switchgrass): 120706582
Help
Entry
120706582 CDS
T07260
Name
(RefSeq) coatomer subunit beta-2
KO
K17301
coatomer subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120706582
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120706582
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120706582
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120706582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
Coatomer_g_Cpla
RAG2
Motif
Other DBs
NCBI-GeneID:
120706582
NCBI-ProteinID:
XP_039847196
LinkDB
All DBs
Position
5K:complement(15133018..15139974)
Genome browser
AA seq
950 aa
AA seq
DB search
MEKPCSLLVHFDKGSAAMANEIKADLEGGDGPAKADAMRRAISLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDRRDPAGRALPEMILICQNLRNNLQSPNEYIRGVTLRFL
CRLSEPEVLEPLVPSVLANLEHRHHFIRRHAVSAVSAIYRLPHGDQLIPDAPELVERLLA
SEQDASARRNAFLMLCACAQERAVAYLLSNADRVAEWPDLLQMAVLDLIRKVCRSQNRAN
KGRYITIITSLLSAPSTAVVYECAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIL
LDRLNELRTTHRDVMVGVVMDVLRALASPNLDVKRKVLDLVLDLLTPRNVEEVVLYLKKE
VVKTQAGDLEKGGEYRQMLVQAIHACAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLFV
REIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSQSEVESAIATIKQCLG
DLPFYTVSDEGEANDSAKPAQPVVNSVTVSSRRPVVLADGTYATQSAATEIISTPSVAPG
SLASTLNLRSLILSGDFFLAAVVACTLTKLVLRLEEVQPSKVESNKACTGALLIMTSILQ
LGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKIWLQSCRQSFAKMLAEKQFRETEEM
KAKSQISHAQPDDLIDFYHLKSRRGMSQLELEDEVHDDLKAATGGFTKDADDANKLNRIL
QLTGFSDPVYAEAFVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNYTL
APETSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCADV
TFRNMWAEFEWENKVAVNTVIQDEKEFLNHIIKSTNMKCLTPPSALDGECGFLAANLYAK
SVFGEDALVNISIEKQLDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccatgctccctcctggtccacttcgacaagggctcggccgcgatggccaac
gagatcaaggcggatctggagggcggcgacggccccgccaaggccgacgccatgcgccgc
gccatctccctcctcctcaacggcgagacgctcccgcagctcttcatcaccatcgtccgc
tacgtgctcccctccgaggaccacaccgtgcagaagctcctcctcctctacctcgagatc
atcgaccgccgcgaccccgccggccgcgcgctgccggagatgatcctcatctgccagaac
ctccgcaacaacctccagagccccaacgagtacatccgcggcgtcaccctgcgcttcctc
tgcaggctctccgagcccgaggtgctcgagccgctcgtcccgtccgtgcttgccaacctc
gagcacaggcaccacttcatccggaggcacgccgtctccgccgtgtccgcgatctaccgc
ctcccgcacggggaccagctcatccccgacgcgccggagctcgtcgagcggttgctcgcc
tctgagcaggatgcatccgcgcggaggaacgcattcctcatgctctgtgcctgcgcgcag
gagcgcgccgttgcctacctgctctccaatgcggaccgcgtagccgagtggcctgatctg
ctgcagatggccgtcctggatctcattcgcaaggtctgccgatcccagaaccgcgccaac
aagggcaggtatatcaccatcattacctcgctgctctctgcgcccagcacggcagttgtt
tatgaatgtgctggcgcgctggtgtcactctcgtcggcacccacggccgtgcgagctgcc
gccaacacctactgccagctgctctcgtcgcagagtgacaacaatgtgaagctcattctc
ctggatcgactcaatgagcttcgcaccacgcaccgggatgtcatggtcggggtggtgatg
gatgtgcttcgcgcgctggccagccccaacttggatgtcaagaggaaggtgctcgatttg
gtgcttgatctgctcaccccgcgtaatgtcgaagaggtcgttctttacctcaagaaggag
gttgtcaagacacaggccggagacctcgagaagggtggtgagtaccgccagatgttggtg
caggccatccatgcctgcgctgttgagtacccagaggtggctggatctgtggtgcacctc
ctcatggattttcttggcgacaccaatgttgctgcggcggttgatgttgtgctgtttgtg
cgtgagatcattgagacaaatccgaagctgcgtgtttccatgatccagaggctgattgat
acattctatcagatccgtgcttcccgtgtctgctcatgcgctctctggatccttggagag
tactccctctctcaatcagaggttgaaagcgccattgccaccattaagcaatgccttggg
gacctaccattctacactgtctctgatgagggggaggcaaatgattctgccaagccagcc
cagccggtggtgaactctgttactgtatcttccaggcgacccgttgttcttgcagatggc
acttatgccacacagagtgctgctactgagatcatttcaactccatcagttgctcctggg
tccttagcttcaaccctgaacctcagatcactcattctgtcaggcgatttcttcctggct
gctgttgttgcatgtaccctgacaaagcttgtactgaggctcgaggaagtgcagccatcg
aaggttgaatcaaacaaagcttgcactggagcattgctgatcatgacgtccattctgcag
ctgggccagtcctcctaccttccccacccgattgataatgattcatatgataggattgtt
ctatgtgtgaggttgctttgcaatactggtgatgatgtcaggaagatctggttgcagtca
tgcagacagagctttgctaaaatgctcgctgagaagcagttcagggagacagaggagatg
aaggcaaagtcacagatctctcatgcccagccagacgatcttattgatttctaccacctg
aagagcaggaggggcatgagccagcttgagttggaagatgaggtccatgatgatttgaaa
gctgcaactggtggatttaccaaggatgcagatgatgcaaacaagctcaaccgcattctg
caattgaccgggttcagtgatcctgtgtatgctgaagcatttgtgacggttcaccattat
gacattgtgcttgatgttacagtcattaaccgcacaaaggagacacttcagaacttgtgc
ttggagttggctacaatgggagacctcaaacttgttgaccgccctcagaactacaccttg
gctcctgagactagcaaacagatccgtgcaaatatcaaggtttcttccacagaaactgga
gtcatatttggcaacatagtatatgagacttctaatgtgatggaacgatcagtggttgtc
ctaaatgatattcacattgacatcatggattacatctcacctgctacatgtgctgatgtt
actttccggaacatgtgggcagaatttgaatgggaaaataaggtggcagtgaacactgtt
attcaggatgagaaggagttcttgaatcacataatcaagtcaacgaacatgaaatgtttg
acaccaccgtctgcgcttgatggagaatgtggtttcctcgctgctaatctttatgcaaag
agtgtgtttggggaggatgctttggtgaacatcagcattgagaagcagctagatggcaag
ctcagtggttacatcagaataaggagcaagacccagggaattgcgctcagcttaggggac
aagatcaccctcaagcagaagggaggcagttaa
DBGET
integrated database retrieval system
