Panicum virgatum (switchgrass): 120706594
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Entry
120706594 CDS
T07260
Name
(RefSeq) rhomboid-like protein 14, mitochondrial
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120706594
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120706594
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120706594
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GFIT
Motif
Pfam:
Rhomboid
Zn_ribbon_RanBP
Stc1
Motif
Other DBs
NCBI-GeneID:
120706594
NCBI-ProteinID:
XP_039847209
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All DBs
Position
5K:complement(15481084..15483200)
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AA seq
344 aa
AA seq
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MGAGMSRGRRRGFGLEASRGMLPLLALQVLLEYGRAGASRPPVTAALLAANTLIYLRPGA
LHEILPSVARVSFNPQLIIEYGDWMRFFLSPFYHLSESHLFYNMTSLLWKGIQLETSMGS
AEFASMVAALLALSQGMTLLMSKGLIFLGDYTAYYDQYAVGFSGVLFAMKVVLNAWSDDF
VYLHGMVIPAKYAAWAELILIQVFIPGTSFLGHLGGILAGLVYLWLKRSFNGPDPFTLLV
SSITKVVTWPLKFAQKLLRSASSQGRITGRGRVGRRASARETPRGLWRCSTCTYDNSIAT
DICEMCSTAREDRSFSRRQNHQDGGSGELSVDEIRHRRLQRFDR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgggggccggcatgagcagaggccggcggcgcggcttcggcctcgaggcgtcgaggggg
atgctgcccctgctggcgctccaggtgctgctggagtacggccgcgcgggcgcctcccgg
ccgcctgtgaccgcggcgctgctcgccgccaacacgctgatctacctccggcccggcgcg
ctccacgagatcctgccctctgttgctcgagtctccttcaatccgcaactcatcatcgag
tatggtgattggatgcgcttcttcctgtcacctttctaccatttgagtgaaagtcacctc
ttctacaacatgacgtcactcttgtggaagggcatacagcttgaaacatcaatgggtagt
gctgagtttgcttccatggttgctgcattgcttgccctgtctcagggtatgacgctgctc
atgtcaaagggcttaatcttccttggtgattatactgcatattatgatcaatatgctgtt
ggattctctggtgtgctgtttgccatgaaggtcgtgctgaacgcctggtcggacgatttt
gtgtatctccacggaatggttattccagcgaaatatgctgcctgggctgagttaatcctc
atccaggttttcattcctgggacatcctttcttggccatcttggtgggatacttgctgga
ctggtttatctttggctgaagcgctcattcaacgggccggatccgtttacccttctggtg
tcaagcattaccaaggttgtgacctggccactgaaatttgctcagaaacttctgcgatct
gccagttcacaaggtcgcataacaggtaggggcagggttgggcgccgtgcatcagcaaga
gagacccctcgagggttatggagatgctcaacctgcacctatgacaactcaattgccaca
gacatctgtgagatgtgcagcactgcacgagaggaccgttctttttcacggagacagaat
catcaagatgggggtagtggtgagctttcggttgacgagatacgccataggaggctgcaa
agatttgacagatga
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