Panicum virgatum (switchgrass): 120706619
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Entry
120706619 CDS
T07260
Name
(RefSeq) putative L-cysteine desulfhydrase 2
KO
K22207
L-cysteine desulfhydrase [EC:
4.4.1.28
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120706619
Enzymes [BR:
pvir01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.28 L-cysteine desulfidase
120706619
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
TSC22
Motif
Other DBs
NCBI-GeneID:
120706619
NCBI-ProteinID:
XP_039847240
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Position
5K:15788237..15790071
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AA seq
462 aa
AA seq
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MATAPHGGQATPDDVDAAAAKRPRAPITEAEVRAEFAHHDGAVARVNNGTFGCCPATVLA
ARARWQRLFLSQPDAFYFHSLQPGLSRSRAAVAAAVGATGAAEVSLVDNATTAAAIVMQH
VAWSFAEGAFARGDAVLMLHYTYSSVKKSIHAYAARAGAAVVEVPLPFPVASPAAVVAEF
RAALARAKAGGRAVRLAVIDHITSMPSVLIPVRDLVAICRDQGVDKVFVDAAHAIGQVPV
DVRDIGADFYTSNLHKWFFCPSAVAFLHIRKDEPIAEQLHHPVVSSEYGNGLPMESAWIG
VRDYSAQLVVPDAVDFMSRFEGGIEGISRRNHDKVIEMGRMLAEAWGTFLGSPPEMCGSM
VMVGLPGCLGIDSDDDAMRLRDMLRNDFKVEVPIFNNSRSVQGQEKMDKDANGDQVTGYV
RISHQVYNVREEYEVLRDAVNKLVLEGFSCSKLRPSGKVLSH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccacggctccgcacggcggtcaagcgacgcccgacgacgtggacgccgccgcggcg
aagcgcccgcgcgcgccgatcacggaggccgaggtccgcgccgagttcgcgcaccacgac
ggcgccgtggcccgcgtcaacaacggcaccttcggctgctgcccggccacggtgctcgcg
gcgcgcgcgcggtggcagcgcctgttcctctcgcagcccgacgcgttctacttccactcc
ctccagccggggctctcccgctcgcgcgccgccgtcgccgccgccgtcggggcgaccggc
gccgccgaggtctccctcgtcgacaacgccaccaccgccgccgccatcgtcatgcagcac
gtggcgtggagcttcgccgagggcgccttcgcgcgcggcgacgccgtgctcatgctccac
tacacctacagctccgtcaagaagtccatccacgcctacgccgcccgcgccggcgccgcc
gtcgtcgaggtcccgctcccgttccccgtcgcctccccggccgccgtcgtcgccgagttc
cgcgccgcgctcgcgcgcgccaaggccggcggccgcgccgtccgcctcgccgtcatcgat
cacatcacctccatgcccagcgtcctcatccccgtcagggacctcgtcgccatctgccgc
gaccagggcgtcgacaaggtcttcgttgacgccgcgcacgccatcggccaggtccccgtc
gacgtgcgcgacatcggggccgacttctacaccagcaacctccacaagtggttcttctgc
ccgtccgccgtcgccttcctgcacatccgcaaggacgaacccatcgccgagcagctccac
caccccgtcgtgtccagcgagtacggcaacgggctgcccatggagagcgcctggatcggg
gtgcgggattacagcgcccagctcgtcgtgcccgacgccgttgacttcatgagccgcttc
gaggggggcatcgaggggataagcaggcgcaaccatgacaaggtcatcgagatgggcagg
atgctcgccgaggcatgggggacgtttcttggctcgccgccggaaatgtgcggaagcatg
gttatggtcggcctgccaggttgccttggcatcgacagcgacgatgacgcgatgagattg
agggacatgttgaggaacgatttcaaggtcgaggtgccaatattcaacaactcgagaagt
gtccaaggacaagagaagatggacaaggacgccaacggcgatcaagtgacagggtatgtg
agaatctcacatcaggtgtacaatgtcagggaggagtatgaggtcctcagggatgcggtc
aacaagcttgttcttgagggtttctcctgcagcaagctgagaccttctggcaaggtgcta
tctcactga
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