Panicum virgatum (switchgrass): 120706636
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Entry
120706636 CDS
T07260
Name
(RefSeq) CBL-interacting protein kinase 1-like
KO
K07198
5'-AMP-activated protein kinase, catalytic alpha subunit [EC:
2.7.11.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120706636
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120706636
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120706636
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.31 [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase
120706636
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CAMKL family
120706636
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120706636
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120706636
Mitophagy factors
Other mitophagy factors
120706636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
NAF
Kinase-like
ABC1
KA1
Haspin_kinase
APH
Kdo
Motif
Other DBs
NCBI-GeneID:
120706636
NCBI-ProteinID:
XP_039847248
LinkDB
All DBs
Position
5K:16029541..16034362
Genome browser
AA seq
463 aa
AA seq
DB search
MVKGEAEAECTRASLLGRYEIGRTLGEGNFGKVKYARHTATGAHFAIKILDRSKILSLRI
DDQIRREIGTLKLLKHPNVVRLHEVAASKTKIYMVLEFVDGGELFDKIAVKRKLSEHEGR
RLFQQLIDGASYCHDKGVYHRDLKPENVLVDRKGNIKISDFGLSALPQHLGNDGLLHTTC
GSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGYLPFDDRNLVVLYQKIFKGDCQIP
KWLSPAAQDLLRKILEPNPMKRINIMGIKEHEWFQKDYVPAVPYDDDEDLLPSSVLPIKE
QIDESAQEKPTHINAFQLIGMASSLDLSGFFEEEDVAQRKIRFTSTHSPKDLFDKMENAV
TEMGFKVHRGPRKLKVLKNCKTSKNSRSPASFLVCIEVFELGPSLYVVELKKSHGDSILY
RQLCERLSDELAVCKTEEIMRTESLGDSDMSSLDGEALPLSGF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagggcgaggcggaggcggagtgcacgcgggcgtcgctgctggggaggtatgag
atcgggcgcaccctcggggagggcaacttcggcaaggtcaagtacgcgcgccacaccgcc
accggcgcccacttcgccatcaagatcctcgaccgcagcaagatcctctcgctccgcatc
gacgaccagataaggagggagatcgggacgctgaagctgctcaagcacccgaatgtcgtc
cgcctgcacgaggttgctgctagcaaaacgaagatttacatggtgcttgagttcgtcgac
ggcggcgagctctttgacaagattgctgtaaagaggaaactgtctgaacatgagggaagg
aggcttttccagcagctaattgacggcgcgagctactgccacgataaaggtgtctaccac
agggaccttaagccagagaacgttcttgttgatcggaagggcaacatcaagatctccgac
ttcggccttagtgctctacctcaacatctcgggaatgatggacttctgcacacaacatgt
ggcagccccaattacatcgctcctgaggttttgcaaaatagaggttatgatggctccttg
tcggatatctggtcttgtggggtaatcctatatgtaatgcttgttggttaccttccgttc
gatgacaggaatcttgttgttctttatcagaagattttcaagggagactgtcagatccca
aagtggctttcacctgctgcacaggaccttcttaggaagattcttgaaccaaatccaatg
aaaaggatcaacatcatgggcatcaaagagcatgagtggtttcagaaggactacgttcct
gccgttccatacgatgacgatgaagatttacttcctagttcagttctcccaatcaaagag
caaattgatgaatcagcacaagaaaagcctactcatatcaacgcttttcagttgatcgga
atggcttcgtcccttgatctttctggtttcttcgaggaagaggacgtggctcaaagaaag
attcggttcacatcaacacattcacccaaggatttatttgacaagatggagaatgccgtg
accgagatgggattcaaagtccataggggaccaagaaagctcaaagtattgaaaaattgc
aaaacttccaagaactccaggagtcccgcatcatttttggtgtgcattgaggtgtttgag
ctagggccgtctttgtatgtcgtagaactgaaaaaatcccatggagattctatattgtat
agacagttgtgtgagaggctctcagatgagctggcggtgtgcaagacagaggagattatg
aggacagaatcgctgggtgactcagacatgtcgagccttgatggcgaagcactacctttg
tctggtttctga
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