Panicum virgatum (switchgrass): 120706667
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Entry
120706667 CDS
T07260
Name
(RefSeq) nodal modulator 1-like isoform X1
KO
K26500
BOS complex subunit NOMO
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120706667
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
120706667
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
DUF7152
NOMO1-like_1st
NOMO_8th
SdrD_B
Ig_NOMO
NOMO_3rd
EMC7_beta-sandw
NOMO1-like_9th
NOMO_5th
SpaA
CarbopepD_reg_2
NOMO1-like_2nd
NOMO_6th
Y_Y_Y
DUF1416
MetallophosN
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
120706667
NCBI-ProteinID:
XP_039847292
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All DBs
Position
5K:complement(16527561..16542479)
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AA seq
1190 aa
AA seq
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MDRRRLPVLLLAFFSAAAASDEIHGCGGFVEASSGLAKSRKASDSKLDYSDITVELCTID
GLVKESTQCAPNGYYFIPVYDKGSFMVRVKGPKGWSWKPETVPVVIDHNGCNGNADINFQ
FTGFMISGKVVGAVGGKSCSKRGGPSGVKVELLTDSDELVASALTSSSGEYSFTNIIPGR
YRLRASHPDYDIELRGSPEVDLRFGNVVADDVFFVSGYNIYGTVVAQGNPILGVHLYLYS
NDITELPCPQDFSDAPREGALCHAISGADGKFMFRSLPCGSYELLPYYKGENTVFDISPS
SLPVSVEHGHMTISQKFQVTGFSVGGRVVDGYGAGVEGANVIVDGQLRTVTDSLGYYRLD
QVTSKKYTITAEKDHYKFNRLENFMILPNLASIDDIRSVRYDVCGIVRTVTPNSKAMVTI
THGPENVKPQRKLVGENGRFCFEVPAGEYQLSALPVDSERYSSLMFSPGSISVNVNSPLL
DLAFSQSQVNVHGKVSCKEECNQNVLVSLVRLAGGVEQEKKTTTLERDNANFVFTKVFPG
KYRIEVKHSSSEGSTKDDWCWDQDTLNVDIGTDDVRDIVFVQKGYWIELVSTHDTEAYIQ
LPDSSILDLSIKKGSQRICVETSGQHEIHLTNPCISFGSSSVLFDTANPMPVHISAKKYL
VKGEIHVDVGSLQENIDSKDIVVDVLKSDGSFVEKISTKPALGKSNQNGFSAFEYSIWAD
LGEDFIFVPHDSSTGRKKVLFYPARQQYSVSLNGCQDTVPQITAKTGLYLEGSVSPATSD
VDVKIISVGKSSYTHLNKGDVATETKTDSDGSFFAGPLYDGIEYKVEASKDGYHLKRTGP
YTFACQKLGQISVRIYGENSELLPSVLLSLSGEEGYRNNSISSSGGTFIFDNLFPGNFYL
RPLLKEYKFNPSAVAIDLNSGESRETEFRATRVAYSAMGSVTLLTAQPKEGVFVEARSES
TGYYEEATTDSFGSFRLRGLVPGSTYTIRVAAKDNLQFAAVERASPDYLSVDVGHEDITG
IDFVVFERPEVTILSGHVEGDGIDILQPHLSVEIRSAAEPSRVESVLPVPLSYYFEVRDL
PKGKHLVQLQSGLPSHTYRFESELVEVDLEKQPQIHVGPLKYKTEERHQKQELTPAPVFP
LIVGVSVIALVISMPRLKDLYQSAVGMTSLGSSVAPTKKEPRKNIIRKRV
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggatcgccgccgtctccccgtcctcctgctcgccttcttctccgccgcggccgcctcc
gacgagatccacggatgtggcggcttcgtcgaggcgagctccggcttggccaagtcgagg
aaggcgtcggactccaagctcgactactccgacatcacggttgagctgtgcactattgat
ggtttggttaaggaaagcacacagtgtgctcctaatggctactatttcattccagtctat
gacaagggttcgttcatggtcagagttaagggccccaagggatggtcatggaagcctgaa
actgttcctgtcgttatcgatcacaatgggtgcaatggaaatgcagatataaatttccaa
ttcactgggttcatgatatcgggtaaagtagtgggcgctgttggtggtaagagctgctcg
aaaaggggaggaccttctggtgtgaaagttgagctgttgacagattctgatgagttggtt
gcatctgcattaacatcatcatcaggagaatattcgtttacaaacataattccagggcgt
tacagattacgcgcttctcatcctgattatgatattgagttgagaggctcaccagaggtt
gacttgcgatttggaaatgttgtggcagatgatgtcttctttgtatctggatacaacatt
tatggcactgtggttgcacagggaaatccgatattgggagtccacctgtacttgtattca
aatgatataacagagctcccttgcccacaagatttcagtgatgcgcccagggaaggtgct
ctttgccatgcaatatctggtgctgatgggaagttcatgtttagatcactaccttgtggt
agctatgagctgttgccatactacaagggggagaacactgtttttgatatttcaccatct
tcacttcctgtttctgttgagcatggtcacatgaccatttcccaaaaattccaggttaca
ggattttctgttggagggcgtgttgttgatggttatggtgctggtgtggagggtgccaat
gttatagtcgatggccagttgagaaccgtaacagatagtcttggttactacagacttgat
caggttacatccaagaagtatactataacagctgagaaggatcactataagttcaaccgt
ttggagaattttatgattttaccaaatttggccagcattgatgatatcagatcagttaga
tatgatgtatgtggtattgtacggacagtaactccgaattcaaaagcaatggtgactata
acacatggacctgaaaacgtaaagccgcaacggaaattagtgggagaaaatggacgattt
tgctttgaggttcctgctggtgaataccagttatctgcattacctgtagattccgaacgg
tattctagtcttatgttttcaccaggatctattagtgtcaatgtaaatagcccattgctt
gatctggcattctctcagtcccaagtcaatgttcatggtaaagtctcgtgcaaagaggaa
tgcaaccaaaatgttctggtctcacttgttagattagctggcggtgttgagcaggaaaag
aagacaactactttggagcgagacaatgccaattttgtgttcacaaaagtatttccgggg
aaatatcgtatagaggtgaagcattcttcatccgagggctcaactaaggatgattggtgc
tgggaccaagataccttgaatgtagacattggcactgatgatgtgagggatattgtattt
gtacaaaaaggctactggattgagctagtttcaactcatgatactgaagcatatattcag
ctgccagattcttctatacttgacttgtcaataaagaaaggatctcagagaatttgtgta
gagacttcagggcagcatgagattcatttaacaaatccttgtatttcctttgggagctca
tctgttttgtttgatacagctaatcccatgccggtccatatcagcgcaaagaagtatctt
gtaaaaggtgaaatccatgtggacgtgggttcccttcaggaaaacattgattccaaggat
atagttgtggatgtcttaaagagtgatggcagctttgtagaaaagatatccaccaaacct
gctcttggaaagagtaatcagaatggcttttctgcctttgagtactctatttgggctgac
ctcggggaggacttcatctttgtcccccatgattctagcactggaaggaaaaaggttctc
ttttatccagcaagacaacagtattcagtgtctctgaatggatgccaagacactgttcct
caaatcactgcaaaaaccggtctgtaccttgaaggatcagtgtcacctgcaacttctgat
gttgatgtcaagattatatcagttggaaagagcagctatacccatctgaacaaaggggat
gtagcaacagagacaaaaacagattctgatggatcattctttgcaggtcccttgtatgat
ggcatagaatataaagttgaagcttcaaaggatggttatcatctgaagcgaactggcccg
tacacctttgcttgtcagaagcttggtcagatatcagtccggatttatggtgaaaattcg
gagctgttaccatcagtattattatccttgagtggtgaggaagggtacagaaataactca
attagtagctctggtggaactttcatatttgacaatttatttcctggaaatttctatctc
cgacctcttcttaaggaatataaattcaatccgtcagcagttgctattgatcttaactct
ggggagtctagagagactgaattccgtgcaaccagagtggcttacagtgccatgggttct
gtaacactgttaactgctcaaccaaaggagggtgtttttgttgaagcaagatctgaatcc
acaggttattatgaggaagctactacagattcttttggtagctttcgtcttagaggactt
gttcctggatcaacttacactataagagtggctgcaaaagataatctccagtttgcagca
gttgagcgtgcttcaccagattatttgtcagttgatgttggtcatgaagatatcactggt
attgattttgtggtatttgaacgcccagaagtaacaatcttgagtggtcatgtggaaggt
gatggtattgatattttgcagccacatctgtctgttgaaatcagatcagcagcagaacct
tctagagtagaatctgttctgcctgttcctctttcatactactttgaagtgagagatttg
cccaaaggcaagcatcttgttcagcttcaatctggccttccatcacatacctataggttt
gaatcagagttggtcgaagtagatctggaaaaacaaccccaaattcatgttggtcccctt
aaatataaaactgaagagcgccatcagaagcaggaactgaccccagcaccagtgtttccg
cttattgttggagtttctgtgattgcactggtgatcagtatgccaaggttaaaggacttg
taccagagtgctgtaggaatgacttccctcgggtcaagtgttgcaccgaccaaaaaggag
ccccggaagaatataataagaaagagggtgtaa
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integrated database retrieval system
