Panicum virgatum (switchgrass): 120706669
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Entry
120706669 CDS
T07260
Name
(RefSeq) kelch domain-containing protein 2-like isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120706669
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120706669
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
120706669
NCBI-ProteinID:
XP_039847294
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Position
5K:16561674..16566089
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AA seq
627 aa
AA seq
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MERRRKAMWLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHFSDVLTLNVETMAWS
SMATTGQRPGTRDSHGAALVGHRMLVFGGTNGGKKVNDLHALDLRTGEWTRPQCKGAPPS
PRESHTVTVVGGDRLVVFGGSGEGESNYLSDVHVLDVPTMTWSTPEVKGDYAPAPRDSHG
AVAVGGRLFVYGGDCGDRYHGEVDVLDVDTMAWSRFPVKGASPGVRAGHAAISVGSKVYI
IGGVGDKQYYSDVWVLDVANRSWSQLEVCGQQPQGRFSHTAVAMNTDIAIYGGCGEDERP
LNELLILQLGSEHPNGRYNISMCKVLSNHWSQEKRKFLRSETQKDASVSNGEMVQKPREA
EIEQRNPFLRGLENGHVKRRKTGEARPNEPESEQEEHSLSLSQHSSPSQSDQEQNGAHKL
SSSPNTSISALQPFVRLNANGTLRAPGPGGANGTLRAPGPGAVSSRPLKTDQLLRTIAPQ
HRQELQFLSSDHKPQPRPPGPPLIGAEVHGTIDGAFDSGYLMTAVVNGQLFRGVLFAPGP
GVTAPRPAVHHQILSSSAVPPQQRPLLAHAIPVHPRQVPQATGFVLPDCAHHARQGFPAK
GVKSEPERGSSDLHDVVLTLGGPGGGK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcggcggaaggcaatgtggctctaccccaaggtggtcggcttcaacccgccg
gagaggtggggccactcagcctgcttcttcgagggggtcgtctacgtcttcgggggatgc
tgcggcggcctgcacttcagcgacgtgctgacgctgaacgtggagaccatggcgtggagc
tccatggccacgacggggcagcgcccgggcacgcgggacagccacggcgccgccctggtg
ggccaccggatgctcgtcttcgggggcaccaacggcggcaagaaggtgaacgacctccac
gcgctggacctgcgcaccggggagtggacccgcccgcagtgcaagggggcgccgccgtcg
ccgcgggagagccacaccgtcaccgtcgtcggaggcgaccgcctcgtcgtgttcggcggg
agcggcgagggggagagcaactacctcagcgacgtgcacgtgctggacgtgcccaccatg
acgtggtccacgccggaggtcaagggcgactacgcgccggcgcccagggacagccacggc
gccgtggccgtcggcggcaggctcttcgtctacggcggggactgcggcgaccggtaccat
ggcgaggtggacgtgctcgacgtcgacaccatggcgtggtcaaggtttccagtaaaggga
gcatcgcctggcgtcagggcaggtcatgcagctatcagcgttggttctaaggtctatatt
attggaggagttggtgataaacaatactacagcgatgtctgggttctcgatgtcgcaaac
cgttcgtggagtcagcttgaggtatgcgggcagcaaccacagggacggttttctcataca
gcggtagctatgaatactgacattgcaatctatggagggtgcggtgaagatgagcgtccc
ctgaatgagcttctcattctgcaattgggctctgagcatccaaatggccgctacaacatt
tcaatgtgcaaggttctaagcaatcactggagccaggagaaaaggaaatttctgagatca
gaaactcagaaagatgcaagtgtgagcaatggagaaatggttcagaaacctcgagaagca
gaaatcgagcaaaggaacccattcctgcgcggccttgagaatggccatgtgaaacgaaga
aaaaccggtgaagctcgtccaaatgagcctgagtcagagcaagaggagcactcactgtct
ctttcccaacattcttcaccgtcgcagtctgaccaggagcagaatggagcacacaagctt
tcatcctctcctaacacgtccatttcagccctgcaaccattcgttcgcctcaatgccaat
ggcacactgagggctccaggacctggaggtgccaatggcacactgagggctcctggacct
ggagctgtttcgtcgaggcctctgaagactgatcagcttctccgcaccattgcaccacaa
catcggcaggaactgcagttcctttcatccgatcacaaaccgcagccccggcctcccggt
ccacccctgattggcgcagaggttcatgggacaattgacggagcattcgactcagggtac
ctcatgaccgccgtggtgaatggccaactcttcagaggcgtactctttgctccaggacct
ggagtgacagctccgagaccggcagtgcaccaccaaatcctctcgagctcggccgtgccc
ccccagcagcggccactgctggctcacgccatcccggtccacccccggcaggtgccacag
gcgacgggcttcgtgctgccagactgcgcccaccacgcgcggcaagggttcccggcgaag
ggcgtcaagtccgaaccagagcgaggcagcagcgacctgcacgacgttgtgctcacgctg
ggagggcctggagggggcaagtga
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