Panicum virgatum (switchgrass): 120706741
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Entry
120706741 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 45, chloroplastic-like
KO
K26938
MATE family, citrate exporter
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120706741
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120706741
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120706741
NCBI-ProteinID:
XP_039847387
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Position
5K:17680878..17688132
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AA seq
546 aa
AA seq
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MLHHHSALVSAHPTICSPARLACSSILCNKANRRTTASPSTNRAKLLQLRGWPSTRQRRT
IPLASGQSLPGYSPDDADQSLQPSDNISFAAAKEAVIGINSGINSGSVSSELILLALPAV
FGQAIDPMAQLMETAYIGRLGALELASAGIGVSIFNIVSKIFNIPLLSIATSFVAEDISK
SAIKHPSSGKLELQSVSSALMLAAGIGIIEALALFLGSGLFLKLMGVSPVSPMYKPAKLF
LSLRALGAPANVLMLAVQGIFRGFKDTKTPVFYIGLGNLSAVVLLPLLIYGFQLGITGAA
ISTVASQYIITILLLRSLSKRAVLLPPRLDQLEFGGYLKSGGMLLGRTLSILLTMTIGTS
MAARQGPTAMAAHQICLQVWLAVSLLADALAVSAQALIASSYAIVDYKRVQKIAMFVLQV
GVVSGLALAVGLYASFGNIARLFSSDQEVLMVVKSCALFVCASQPINALAFIFDGLHYGV
SDFDYVAQATIAVGVMSSLVLLWAPSVFGLAGVWIGLTTLMGLRMAAGILRLLWKWGPWS
FLHEEP
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccaccatagtgcgcttgtctctgcgcacccaacgatttgttcacccgctagg
cttgcttgttcttccatattatgtaacaaagcaaacagaagaaccaccgcttcaccgtca
accaaccgtgcaaagttgctccagctgcgggggtggccttctacacggcagcggcgcacc
atccctctcgccagtggccagtcactgccaggatacagccccgacgatgctgatcaaagc
cttcaaccaagcgacaacatctctttcgctgctgcaaaggaggctgtcataggaataaac
agtgggatcaattctgggagtgtcagcagtgagctaattcttctagctctaccggcagtc
tttggtcaagctattgatccaatggcgcaacttatggagactgcatacattggtagatta
ggtgcattggaattggcttcggctggtattggtgtatcgatttttaatattgtgtcaaag
atcttcaacataccattgttgagcattgcaacttcatttgtggcagaggatatttctaaa
agtgctatcaagcatcctagttcaggcaaattggagcttcaatctgtatcatctgccttg
atgttagctgctggaattggtataattgaagcattagcattgttcctaggatcaggattg
tttcttaaactaatgggcgtgtcacctgtctctccaatgtataagcctgcaaaactcttt
ctttcattgagagctctgggagcccctgcaaatgtgcttatgctggcagtccaaggtatc
tttcggggattcaaggacaccaagactccagtgttttatataggattgggcaatctctct
gctgtagtccttcttcctctacttatatatggctttcagcttggcataaccggagctgca
atttctactgttgcgtcccagtacattattacaattcttcttcttcggtctcttagtaaa
agagcagttctacttcctccgagactagaccagttagagttcggtggatatctgaaatct
ggtggtatgctgttggggagaactctctcaattctattaactatgaccattggtacatca
atggctgctcgacaaggcccaacagctatggctgctcatcagatttgtttgcaagtatgg
cttgctgtgtctttgcttgctgatgctttagcagtttctgcccaggcactaatagcaagc
tcttatgcaatagtggactacaaaagggttcagaagatagcaatgtttgtgttgcaggta
ggagtagttagtggattagccttggctgttggtttgtatgcctcatttggcaatatagct
agactatttagcagtgaccaagaggtcctaatggttgtcaaatcatgtgcattgtttgtc
tgtgccagtcaaccaattaatgccctggcattcatttttgatggtctacattacggtgta
tcagattttgactatgttgctcaagctactattgcggtcggggtcatgtcatcactggtc
ctgttatgggctccatctgtatttggcttggctggagtctggattggtttgactacactc
atggggttgcgcatggctgcaggcatcttgaggttgctatggaaatgggggccttggtcg
tttttgcatgaggagccataa
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