Panicum virgatum (switchgrass): 120706742
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Entry
120706742 CDS
T07260
Name
(RefSeq) UDP-glucuronic acid decarboxylase 2-like
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120706742
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
120706742
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
KR
adh_short
TrkA_N
Motif
Other DBs
NCBI-GeneID:
120706742
NCBI-ProteinID:
XP_039847391
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All DBs
Position
5K:complement(17694637..17698468)
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AA seq
433 aa
AA seq
DB search
MASELTYRGGAAAHGSASNGGEYSPKPSKPLSWLSRAARYAAAEHRPVFALAGMLFAAAL
FTFSSSSSSSTSASSYTAASAGFRHLAIAGHPSFRESSVGGKVPLGLRRRALRVLVTGGA
GFVGSHLVDRLVERGDSVIVVDNFFTGRKGNIAHHLQNPRFEVIRHDVVEPILLEVDQIY
HLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIGARFLLTSTSEVYGDPLQHPQVET
YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGPRMCIDDGRVVSNF
VAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGDHIGPFNLGNPGEFTMLELAKV
VQDTIDPEAHIEFRPNTADDPHKRKPDISRAKELLGWEPKVPLHEGLPLMVTDFRKRIFG
DQEESTEAAGGLS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggagctcacgtaccggggcggcgccgcggcgcacggctccgcctccaacggc
ggggagtactccccgaagccctccaagccgctctcctggctctcgcgcgccgcccgctac
gccgccgccgagcaccgccccgtcttcgccctcgccggcatgctcttcgccgccgccctc
ttcaccttctcctcctcctcctcctcctccacatccgcctcgtcctacaccgccgcgtcg
gccggattcagacacctcgccatcgccgggcacccgtccttccgcgagtcctccgtcggc
ggcaaggtgcccctgggcctgcggcggcgcgcgctgcgggtgctcgtgacgggcggcgcc
gggttcgtggggagccacctggtggaccggctggtggagcgcggcgacagcgtgatcgtc
gtggacaacttcttcacggggcgcaaggggaacatcgcgcaccacctccagaaccccagg
ttcgaggtgatccgccacgacgtcgtcgagcccatactgctcgaggtcgaccagatctac
cacctcgcctgcccggccagccccgtgcactacaagtacaacccaatcaagaccatcaag
acaaatgtagttgggacactgaatatgcttggattggcaaagaggattggggcaagattt
ctactcaccagcaccagtgaggtctatggtgatcccctccagcaccctcaggtggaaact
tactggggcaatgtcaatcctattggtgtccggagctgctatgatgagggaaagcgcact
gctgaaacattaaccatggactaccatcgcggtgccaaccttgaggtgaggatcgcccgg
atcttcaacacatatggtcctcgcatgtgcatcgatgatggccgtgttgtcagcaatttt
gttgctcaggcgctgaggaaggagcctttgactgtctatggtgatggcaagcagactagg
agctttcagtacgtctcggatttggtggaagggctgatgaagctaatggaaggggaccac
attggaccgttcaacctgggaaaccctggtgaattcacgatgctggagctggctaaggtg
gtccaggacaccattgacccagaagcgcacattgagttccgtccaaacactgcagatgat
ccacataagcgcaagcctgacatcagccgagccaaagagcttcttggctgggagcccaag
gttcccctacatgagggccttcctctcatggtcactgacttccgcaaaagaatcttcggg
gaccaggaagaatccactgaggcagctggtggcctttcttaa
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