Panicum virgatum (switchgrass): 120706780
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Entry
120706780 CDS
T07260
Name
(RefSeq) CRS2-associated factor 2, chloroplastic-like
KO
K27710
CRS2-associated factor 2, chloroplastic
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120706780
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120706780
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
120706780
NCBI-ProteinID:
XP_039847443
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Position
5K:18191072..18195780
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AA seq
618 aa
AA seq
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MPPPPPQRPAPSRAGRANLFSAPPPPLSNRRYPQHRSLPLPPLPPRRRHPRNHPEQRSQE
QQEPADGGPRATTSNDSPAFRAAHLRTAYRKPVPPVAAAGDGEALLAADPADAASGRAVV
VGPSGLSFRLPGAPFDFQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEE
KARRRGVRLHTPLGQESPQTVSPHGIMMEVRGRRQRDLARVSPGDGRTRDEVLGEPLTRA
EVRELVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMNNLCYYL
EEKSGGKVIHRVGGVVFLYRGRHYDPRTRPRYPLMLWKPATPVYPKLIKEVPEGLTKEEA
DEMRRKGCDLPPICKLAKNGIYITLVKDVRDAFEGNDLVKIDCEGLNPSDYKKIGAKLRD
LVPCVLLSFDNEQILMYRGKEWKSRYSKPLTLIPKVPKNYTTVSTDVSGSDTDEATDVSA
QVMVREVLRPKIFKLWKSAVDSSLALLLDDAEANVLTPDSLLTRVEEFSITSQAVEHSFP
ALVVANHNEVDTKCTSAEYINDESETSIVAGNQEDQLDQSPDLSNDEHFELDMLERLESS
LPLGSLPIDTMIEQLNSD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaccgccgccgcagcggccggctccctcccgcgccggccgcgcgaacctcttc
tccgccccgccgcctcccctctccaaccgccgctacccgcagcaccggtcccttcccctc
ccgccactcccccctcgccgccgccaccccaggaaccatcccgagcagcgttcccaagaa
cagcaggaaccagcagacggcggtccgagagcgaccaccagcaacgacagccccgccttc
cgcgcggcgcacctccgcaccgcgtaccgcaagcccgtgcccccggtcgcggccgccggc
gatggcgaggctctcctcgccgccgacccggccgacgctgcctcgggccgcgccgtcgtc
gtggggccctcgggcctctccttccgcctccccggcgcgccgttcgacttccagttcagc
tactccgaggcgccccgcgcgccgccgctcgccatccgggagcccgcgttcctgcccttc
gcgccgccgaccatgccgcggccctggacgggcaaggcgccgctgctcaccaaggaggag
aaggcgcgccgccggggcgtgcggctgcacacgccgctcgggcaggagtcgccgcagacg
gtgagcccgcacgggatcatgatggaggttagggggaggaggcagagggacctggccagg
gtgagccccggcgacggcaggaccagggatgaggtgctcggcgagccgctcactcgcgcc
gaggtgcgcgagctcgtcaagcctcacatctcgcacaaccgacagctcaatattggaaga
gatggcttgactcacaatatgttggaaatgatacattgtcattggaggcggcaggaaatc
tgtaaagttagatgccgaggtgttccaactgtcgatatgaacaatctctgttattacctt
gaggaaaagtcaggtggaaaggttattcacagagtaggtggcgttgtttttctatatcga
gggagacattatgacccacggactcgtcctcgctatcccctaatgctctggaaacctgct
actcctgtatatccaaaactcatcaaggaagtcccagaagggcttacaaaagaagaagca
gatgaaatgagaagaaaagggtgtgatctgccaccaatttgtaaattagcaaaaaatgga
atatatatcactcttgtcaaggatgtgcgagatgcttttgaaggaaatgacctagtgaag
attgattgtgagggtttgaatccaagtgactacaaaaagataggagcaaaactaagggat
cttgttccttgtgttcttttatcatttgataatgaacagatattaatgtaccgaggcaaa
gaatggaaatccagatactcgaagcctctgactctcattccaaaagttccaaagaattat
acgacagtgtcaactgatgtgagtggttcagataccgatgaagccaccgatgtcagcgct
caagtcatggtaagagaagtattaaggcccaaaatatttaaattgtggaagagtgcagtg
gactcgtctctggcattgctgctggatgatgccgaagcaaacgttctcacacccgattca
ctcctgacgagggttgaggagttcagcatcacatctcaggcagtggagcactcatttcca
gctctggttgtggccaatcacaacgaggtggacaccaaatgtacaagtgccgagtacata
aacgatgagtctgaaacgagcattgttgccggaaaccaagaggaccagcttgatcaatca
cctgatctcagcaacgacgaacactttgaactcgacatgctcgagcgcctggagtcgtca
ttgccattaggatcgctgccgatcgacactatgatagagcagctgaacagtgactga
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