Panicum virgatum (switchgrass): 120706869
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Entry
120706869 CDS
T07260
Name
(RefSeq) exocyst complex component SEC15B-like
KO
K19985
exocyst complex component 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120706869
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex
120706869
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120706869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec15_C
EXOC6_Sec15_N
DUF6631
DUF3829_2nd
Motif
Other DBs
NCBI-GeneID:
120706869
NCBI-ProteinID:
XP_039847544
LinkDB
All DBs
Position
5K:complement(19995011..20002206)
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AA seq
809 aa
AA seq
DB search
MRRKLAGDAPPSAGGGHAPSASAPSEADLAQLSAAIAAGEDLGPFVRRAFACGRPEPLLA
SLRAAVRDREAEIEELCRAHFHDFIRAVDDLRSLLADADALKGSLSASHSALLSSAAPLL
ASLESFLAARSLAGNLSSALASSRRCVRLLALAARANAHLQAGNHGLYLALRAVDAIDRD
LASGPEPLPLPTLRRMLLSVVPAMRAHAEREISREFSDWMVSIRAASRHLGQVAIGRSAA
ARQRQEELRSKHRPLEECITLDDDGVGDLDDFAAAAATADAADGAAAASFDLTPLYRAMH
IHQTLALGEQFKKYYLENRKLQLTSDFDVIAATPFLESHQVFFSQIAGFFIVEDRVFRTG
GGLSSRPDVDALWDAAVGKMVSVMEDNFSRMQTANHLLLITDYAALLSATMRRYGYPVGM
LLDVLARHRDKYHDLLLADCRRQVAEALAADKFDQMLMRKEYEYSMNVLAFGIQSSDITP
AFPYVAPFSCTVPDICRIVRSFIEDSVSFMAHGGGGDTYAAVKKYLGRILSEVVDASIQK
LVDSGSGLSVSQAMQVAANMSVMERACEFFTRHAAQLCGVPLRAVERGRRDFPLRRSRDA
AEALLLRLLRAKADEFMRQSDGVNWMADDPPPGGNEYANEVIIYLETLTSTAQQILPLPV
LRRVLVAVLAHISERIVDLFLNDSVKRFNANAVTGIDTDLKMFEAFAEGMSSLFEDSDQE
SVKNEMKAALVEARQLVNLLMSNSPETFLNPVIREKNYNKLDYRKVAIISEKFRDTSESY
FSTFGTRGARQNPKKKSLDTLIKRLREAS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcaagctcgccggcgacgcgccgccgtcggcgggcggcggacacgcgccgtcc
gcctccgcgccgtccgaggcggacctcgcgcagctctccgccgccatcgcggccggggag
gacctgggccccttcgtgcgccgggcgttcgcgtgcggccgccccgagccgctgctcgcc
tcgctccgcgccgcggtgcgggaccgggaggctgagatcgaggagctctgccgcgcccac
ttccacgacttcatccgcgccgtcgacgacctccgctccctcctcgccgacgccgacgcg
ctcaagggctccctctcggcgtcccactccgcgctcctctcctcggcggccccgctgctc
gcctcgctcgagtccttcctcgccgcgcgctcgctcgcggggaacctctcctccgccctc
gcctcctcccgccgctgcgtgcggctgctcgcgctcgcggcgcgggcgaacgcgcacctc
caggccggcaaccacgggctctacctcgccctgcgcgccgtcgacgccatcgaccgtgat
ctcgcctcggggccggagccgctgccgctccccacgctccgccgcatgctgcttagcgtc
gtccctgccatgcgcgcccacgccgagcgcgagatctccagggagttctccgactggatg
gtcagcatccgcgccgcgtcgaggcaccttggtcaggtggccatcggccgctcggctgct
gccaggcagcgccaggaggagctccgctccaagcaccgaccgctggaggagtgcatcact
ctggatgacgatggagtgggtgaccttgatgattttgcggcagccgcggcaacagctgat
gctgcagatggtgctgctgcagcctcgtttgaccttacaccactctatcgagcgatgcat
atacaccagacgctggcgctgggtgagcagttcaagaagtattacctggagaacaggaag
ctgcagcttacttcggactttgatgtcattgcggcgacgccattcctcgagtcccaccag
gtgttcttctcacagattgctgggttctttattgttgaggaccgggtgttcagaacaggg
ggtgggctctcatctcggccagatgtagatgcactctgggatgctgccgtggggaagatg
gtctctgtgatggaggataatttctccaggatgcagacagcaaaccacttgcttctcata
actgattatgctgctttactttctgccacaatgcggcgttatggttatccagtagggatg
ctgcttgatgtgctcgctaggcacagagacaagtaccatgatttgctacttgcagattgc
cgtagacaggtggcggaggcactggccgcagataagtttgatcagatgctcatgagaaag
gagtatgagtactcaatgaatgttcttgcatttgggattcagagctcagacattaccccg
gctttcccatatgttgctccattctcatgcactgtcccagacatttgccgaattgttcgt
tcattcattgaagattctgtgagcttcatggcacatggtggtggtggggacacctatgca
gcagtgaaaaagtaccttggtcggatcctctctgaggtggtggatgcctcgattcagaag
cttgtggattcaggcagtggtctaagtgtgtcccaggcaatgcaggttgctgctaacatg
tctgtcatggagcgggcatgtgagtttttcacacgccatgctgctcaactgtgtggtgtg
ccgttacgcgccgtggagcgtggtcggcgtgacttcccacttcgcaggtcgcgcgatgct
gcggaggcgctcctgctgcggctattgcgtgccaaggctgatgagttcatgaggcaatct
gatggtgtcaactggatggctgatgaccctcctcctggcggcaatgagtatgcgaacgag
gtcatcatctatcttgagacgctcacgtcaactgcgcagcagatcctccctcttcctgtt
ctccgccgtgtacttgtggcagtgcttgcccacatctcagagaggattgttgatctcttc
ttgaatgattcagtaaaacgtttcaatgcgaatgcagtcactggtatagatactgatctc
aaaatgtttgaggcgtttgcagagggcatgtccagcctattcgaggactctgatcaagag
tccgtgaaaaatgaaatgaaggctgcacttgtggaagcaagacagctggtgaatcttctt
atgagcaatagtccagagacattcctaaatccggtgatccgtgaaaagaactacaacaag
ctagattatagaaaggttgcaatcatctctgagaagtttagggatacgtcagagagttat
ttctcaacattcggaacaaggggtgccagacagaacccaaagaagaaatctctggatacc
ctgatcaagaggctcagagaagccagctag
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