Panicum virgatum (switchgrass): 120706878
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Entry
120706878 CDS
T07260
Name
(RefSeq) thiamine pyrophosphokinase 2 isoform X1
KO
K00949
thiamine pyrophosphokinase [EC:
2.7.6.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00730
Thiamine metabolism
pvir01100
Metabolic pathways
pvir01240
Biosynthesis of cofactors
Module
pvir_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
120706878
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.2 thiamine diphosphokinase
120706878
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Motif
Pfam:
TPK_catalytic
TPK_B1_binding
Motif
Other DBs
NCBI-GeneID:
120706878
NCBI-ProteinID:
XP_039847559
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Position
5K:complement(20555341..20565506)
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AA seq
266 aa
AA seq
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MLWRTVRSMDVMMHSSSFLPKLHRPANRPVKNYALVVLNQHLPRFMPRLWDHANLRICAD
GGANRIFDEMFQLTNDGDEKSTRNRYIPEIIEGDMDSIRPEVKLFYSSQGSKISDKSHNQ
ETSDLHKCISRIHHRTPEHEKHNLCVLVTGALGGRFDHEAANINVLYLFSDLRIVLLSDD
CLIRLLPKTHRHELYIESSVEGPHCGLFPVGAPSTNTTTTGLKWNLSESKMRFGSMISTS
NIVQSEKVAVQSDADLLWTISLRNMA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggcgcacagtacgcagtatggatgtaatgatgcattcttcgagtttcctccca
aaactgcatcgacctgccaacagaccagtcaagaactatgctttagttgttcttaaccag
catcttccacgattcatgcctcgcctctgggatcatgcgaacttaaggatctgtgccgat
ggaggtgctaatcgtatttttgatgagatgtttcagttgaccaatgatggagatgagaaa
agcaccagaaataggtatattccagaaattattgagggggatatggattctataaggcct
gaagtaaaattgttctactctagtcagggatccaaaatttctgataaatcacataaccag
gagacatcagatttacacaaatgtatttctcgtatccatcaccgtacacctgaacatgaa
aaacataatctgtgtgtccttgttactggagcactaggtggaaggtttgatcatgaggca
gcaaatatcaatgttctgtatctgttttcggacttgagaattgtgcttctatcagatgat
tgcttgatccgacttcttcccaaaacacatcgccatgaactttatattgaatcatctgtt
gaaggaccacattgtgggctttttcctgttggagcaccgtcaacaaacaccacaaccact
ggactgaaatggaatctaagtgaatcaaagatgagatttgggagcatgataagcacatcg
aacattgtgcaatcagagaaggtagctgtacagtctgatgcagatcttttgtggacaatt
tctctacgaaacatggcctaa
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