Panicum virgatum (switchgrass): 120706922
Help
Entry
120706922 CDS
T07260
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120706922
04120 Ubiquitin mediated proteolysis
120706922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120706922
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
120706922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
120706922
NCBI-ProteinID:
XP_039847613
LinkDB
All DBs
Position
5K:21434461..21440506
Genome browser
AA seq
755 aa
AA seq
DB search
MTRNREPVPLEVGWKQMEAGTKKLERILDDEPGVAFKSDEYMKLYTTIYDMCTQKAPHDY
TSELYDRYKMVLDKYITDTVLPSLREKHGEFLLRELVLRWKNHRIMVKWLSRFFNYLDRY
YIPRRSIVGLKAVGQSCFETLVYDELKATVTSIVIAMIDEDREGQIIDRTLIKNVLDTYI
ELGQDLTTEHQPTRPDSGSKLYSEDFQDAFRQGTVDYYSKKAQTWIVEDTCPEYMLKAEE
CLQKEKERVAHYLHSSTEPTLMEAAQGELLAKLIDQILKKENSGCKVLLCDEKVEDLSRM
FRLFSRIKDGLPPVSKIFQEHVNKVGMSLVKQAVDAATSKKNEKKDVVSALELDYVRKII
DLHDKYMAYVLNCFQNHTLFHKALKEAFEVVCNKDVAGCTSAELFASYCDNILRKGGIEK
LSDEAIEENLDKVVKLLTYISDKDLFIEFHRKKLGRRLLFDKSGNDEQERSLLSKLKQHF
GGQFTSKMEGMLNDICAAKENQAKYDEYISTNPELHPSVDLSVQVLTTGYWPTYKSSDIN
LPSEMVKCVEGFKEFYQSFKKHRKLNWIFSLGSCHIVGKFDVKPIELILTTYQGALLLLF
NEAEKLSFSEIATQLNLSEDDTARVLHSLSCGKYKILNKEPCSRTISPNDIFEFNHKFTD
KMRRIKVQLPPSDEKKKVIDDVNKDRRFAIDASLVRIMKSRKIMTHQNLVAECVEQLSRM
FKPDIKMIKRRIEDLITREYLERDVDAANSYRYLA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaaaccgcgagccggtcccgctcgaggtggggtggaaacaaatggaagccggc
accaaaaagctagagcgcatcctcgacgacgagcccggcgttgccttcaagtccgatgag
tacatgaagctctacacgacgatatacgacatgtgcacgcagaaggcgccgcacgactac
acgtcggagctctacgataggtacaagatggtcttggacaagtacatcaccgacaccgtg
ttgccctccctgagggagaagcacggcgagttcctgcttagggaactggtgctcaggtgg
aaaaaccataggataatggtcaagtggctgagcaggttcttcaactaccttgaccgctac
tacattccacgaaggtcaattgtggggctcaaagcagttggccagagttgcttcgaaact
ctggtctacgacgaactcaaagcaacagtgacatcgattgtgattgccatgatcgacgag
gatagggagggccagattatagaccgtacccttatcaagaatgttcttgatacctatatt
gaacttggccaggatctaacaacagaacatcaacccaccaggcctgattccgggtcaaag
ctttacagcgaggactttcaagatgcatttcgtcagggtacagtagattattattctaag
aaggcccaaacctggatcgtggaggatacttgccctgagtacatgcttaaggctgaggag
tgcttacaaaaagagaaggaacgagttgcacattatttacattcatctactgaaccgaca
ctaatggaggctgcacaaggagaattgctagctaagctcatcgaccaaatccttaagaag
gagaattctggctgcaaagttttactttgtgatgaaaaggttgaagatttgtcaaggatg
tttaggctattctctaggattaaagatggtctgcctccagtatctaaaatattccaggag
catgtcaacaaagtaggcatgtcattggtgaaacaagctgtagatgctgccaccagcaag
aagaacgagaaaaaggatgtagtgagtgcgctggagctggattatgtgcggaaaatcata
gatctccatgacaaatacatggcatacgtcctcaattgtttccagaaccatacactattt
cacaaggcacttaaggaggcctttgaagttgtttgtaataaagatgttgctggctgcact
agtgccgaattgtttgcatcgtattgcgacaatattcttcgaaaaggcggaatcgaaaaa
cttagtgatgaagcaattgaagagaaccttgataaggttgtgaagcttctgacatacatc
agtgataaggacctatttattgagtttcataggaagaagctagggaggagattgcttttt
gataagagtggcaatgatgaacaagagagaagcttactttccaagctaaagcagcatttt
ggagggcagtttacttcaaaaatggagggcatgctaaatgatatttgtgctgcaaaagaa
aatcaagcaaaatatgatgagtacatcagcacgaacccggagttgcatccttcggtagat
ctgagtgttcaggttttgacgacaggatattggccaacatacaaaagcagtgatataaat
cttccttcagagatggttaaatgtgtagaggggttcaaggagttttatcaatcattcaag
aaacacagaaagcttaactggattttttccttgggaagttgccacatcgttgggaagttc
gatgtgaaacccattgagctcattcttacaacttatcagggggcactactcttgctattc
aacgaagctgagaaactaagtttctctgagattgcgacacaactaaatctttccgaagat
gatactgcacgtgtgctccattctctctcatgtgggaagtacaagattctcaacaaagag
ccatgtagcagaacaatctccccaaatgacatctttgagttcaaccacaagtttactgat
aagatgcggaggataaaggtgcaacttcctccatccgacgagaagaaaaaggtcattgat
gatgtcaacaaggacaggaggtttgcaattgacgcatccctggtgcgtatcatgaagagc
cgcaagatcatgacccatcagaatctggttgcggagtgtgtggaacagctcagccgcatg
ttcaagcctgacatcaaaatgatcaagagaaggattgaggaccttatcacgagagaatac
ctggagcgcgatgtagatgcggccaactcgtaccgatacttggcttga
DBGET
integrated database retrieval system