KEGG   Panicum virgatum (switchgrass): 120706922
Entry
120706922         CDS       T07260                                 
Name
(RefSeq) cullin-1-like
  KO
K03347  cullin 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04120  Ubiquitin mediated proteolysis
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120706922
   04120 Ubiquitin mediated proteolysis
    120706922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120706922
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     120706922
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 120706922
NCBI-ProteinID: XP_039847613
LinkDB
Position
5K:21434461..21440506
AA seq 755 aa
MTRNREPVPLEVGWKQMEAGTKKLERILDDEPGVAFKSDEYMKLYTTIYDMCTQKAPHDY
TSELYDRYKMVLDKYITDTVLPSLREKHGEFLLRELVLRWKNHRIMVKWLSRFFNYLDRY
YIPRRSIVGLKAVGQSCFETLVYDELKATVTSIVIAMIDEDREGQIIDRTLIKNVLDTYI
ELGQDLTTEHQPTRPDSGSKLYSEDFQDAFRQGTVDYYSKKAQTWIVEDTCPEYMLKAEE
CLQKEKERVAHYLHSSTEPTLMEAAQGELLAKLIDQILKKENSGCKVLLCDEKVEDLSRM
FRLFSRIKDGLPPVSKIFQEHVNKVGMSLVKQAVDAATSKKNEKKDVVSALELDYVRKII
DLHDKYMAYVLNCFQNHTLFHKALKEAFEVVCNKDVAGCTSAELFASYCDNILRKGGIEK
LSDEAIEENLDKVVKLLTYISDKDLFIEFHRKKLGRRLLFDKSGNDEQERSLLSKLKQHF
GGQFTSKMEGMLNDICAAKENQAKYDEYISTNPELHPSVDLSVQVLTTGYWPTYKSSDIN
LPSEMVKCVEGFKEFYQSFKKHRKLNWIFSLGSCHIVGKFDVKPIELILTTYQGALLLLF
NEAEKLSFSEIATQLNLSEDDTARVLHSLSCGKYKILNKEPCSRTISPNDIFEFNHKFTD
KMRRIKVQLPPSDEKKKVIDDVNKDRRFAIDASLVRIMKSRKIMTHQNLVAECVEQLSRM
FKPDIKMIKRRIEDLITREYLERDVDAANSYRYLA
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgacgcgaaaccgcgagccggtcccgctcgaggtggggtggaaacaaatggaagccggc
accaaaaagctagagcgcatcctcgacgacgagcccggcgttgccttcaagtccgatgag
tacatgaagctctacacgacgatatacgacatgtgcacgcagaaggcgccgcacgactac
acgtcggagctctacgataggtacaagatggtcttggacaagtacatcaccgacaccgtg
ttgccctccctgagggagaagcacggcgagttcctgcttagggaactggtgctcaggtgg
aaaaaccataggataatggtcaagtggctgagcaggttcttcaactaccttgaccgctac
tacattccacgaaggtcaattgtggggctcaaagcagttggccagagttgcttcgaaact
ctggtctacgacgaactcaaagcaacagtgacatcgattgtgattgccatgatcgacgag
gatagggagggccagattatagaccgtacccttatcaagaatgttcttgatacctatatt
gaacttggccaggatctaacaacagaacatcaacccaccaggcctgattccgggtcaaag
ctttacagcgaggactttcaagatgcatttcgtcagggtacagtagattattattctaag
aaggcccaaacctggatcgtggaggatacttgccctgagtacatgcttaaggctgaggag
tgcttacaaaaagagaaggaacgagttgcacattatttacattcatctactgaaccgaca
ctaatggaggctgcacaaggagaattgctagctaagctcatcgaccaaatccttaagaag
gagaattctggctgcaaagttttactttgtgatgaaaaggttgaagatttgtcaaggatg
tttaggctattctctaggattaaagatggtctgcctccagtatctaaaatattccaggag
catgtcaacaaagtaggcatgtcattggtgaaacaagctgtagatgctgccaccagcaag
aagaacgagaaaaaggatgtagtgagtgcgctggagctggattatgtgcggaaaatcata
gatctccatgacaaatacatggcatacgtcctcaattgtttccagaaccatacactattt
cacaaggcacttaaggaggcctttgaagttgtttgtaataaagatgttgctggctgcact
agtgccgaattgtttgcatcgtattgcgacaatattcttcgaaaaggcggaatcgaaaaa
cttagtgatgaagcaattgaagagaaccttgataaggttgtgaagcttctgacatacatc
agtgataaggacctatttattgagtttcataggaagaagctagggaggagattgcttttt
gataagagtggcaatgatgaacaagagagaagcttactttccaagctaaagcagcatttt
ggagggcagtttacttcaaaaatggagggcatgctaaatgatatttgtgctgcaaaagaa
aatcaagcaaaatatgatgagtacatcagcacgaacccggagttgcatccttcggtagat
ctgagtgttcaggttttgacgacaggatattggccaacatacaaaagcagtgatataaat
cttccttcagagatggttaaatgtgtagaggggttcaaggagttttatcaatcattcaag
aaacacagaaagcttaactggattttttccttgggaagttgccacatcgttgggaagttc
gatgtgaaacccattgagctcattcttacaacttatcagggggcactactcttgctattc
aacgaagctgagaaactaagtttctctgagattgcgacacaactaaatctttccgaagat
gatactgcacgtgtgctccattctctctcatgtgggaagtacaagattctcaacaaagag
ccatgtagcagaacaatctccccaaatgacatctttgagttcaaccacaagtttactgat
aagatgcggaggataaaggtgcaacttcctccatccgacgagaagaaaaaggtcattgat
gatgtcaacaaggacaggaggtttgcaattgacgcatccctggtgcgtatcatgaagagc
cgcaagatcatgacccatcagaatctggttgcggagtgtgtggaacagctcagccgcatg
ttcaagcctgacatcaaaatgatcaagagaaggattgaggaccttatcacgagagaatac
ctggagcgcgatgtagatgcggccaactcgtaccgatacttggcttga

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