Panicum virgatum (switchgrass): 120706935
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Entry
120706935 CDS
T07260
Name
(RefSeq) putative 12-oxophytodienoate reductase 11
KO
K05894
12-oxophytodienoic acid reductase [EC:
1.3.1.42
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00592
alpha-Linolenic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
120706935
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.42 12-oxophytodienoate reductase
120706935
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Gene cluster
GFIT
Motif
Pfam:
Oxidored_FMN
Motif
Other DBs
NCBI-GeneID:
120706935
NCBI-ProteinID:
XP_039847630
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Position
5K:complement(21875385..21877541)
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AA seq
370 aa
AA seq
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MDSAPPPLRTPYKMGAFNLAHRVVLAPLTRCRAYGNVAQPAHMSLYYCQRATPGGLLISE
ACAVSEAARGYPDVPGLWTDEQVDAWKPIVDAVHARGAVFFAQIWHTGRVSAPEFQPNGQ
APISSTDKQVPPQVSQDGHVVTFAVPRRLETNEIPLVVNEFRVAARNAIKAGFDGVEIHA
ANGYLFDQFMKDSTNDRNDMYGGTLENRCRFTAEVVAAVAGEVGADRLGVRLSPFADYMD
CSDSDPETLALHVIHRTLNPTGVLYCHMLEPRMRVNPDDGKLTLPHMLLPFRKAFRGTFI
VSGGYDREEGDAAIANGYGDLVAYGRLFLANPDLPARFARNARLNEYDRSTFYTSDPVVG
YTDYPFLDQF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggattcggctcctcctccgctccggacaccgtacaagatgggcgcgttcaacctggcc
cacagggttgtgctggcgccgctgacgaggtgccgggcgtacgggaacgtggcgcagccg
gcgcacatgtcgctctactactgccagcgcgcgacgccgggcggcctcctcatctcggag
gcctgcgccgtgtcggaggccgcgcgcgggtacccagacgtgccggggctctggaccgac
gagcaggtggatgcatggaagcccattgtcgacgccgtgcacgccaggggcgccgtcttc
ttcgcccagatctggcacaccggccgcgtctccgcgccagagttccaaccaaacggacag
gcaccaatttcgagtacggacaagcaagtcccaccgcaggtgagccaagacggtcacgtc
gtcacgttcgcggtgcctcggaggttggaaacaaatgagataccactcgtcgtcaacgag
ttccgggtcgctgctagaaacgcgatcaaagcaggcttcgacggtgtggagatccacgcg
gcgaacgggtacctgttcgaccagttcatgaaggacagcacgaacgaccgcaacgacatg
tacgggggcaccctggagaaccgatgccgcttcaccgcagaggtggtcgcggccgtggcc
ggcgaggtgggcgcagatcgattgggcgtgcggctctccccgttcgcggactacatggac
tgcagcgactctgacccggagacgctggcgctgcacgtcatccaccgcacgctgaatcca
accggcgtgctctactgccacatgctagagccgaggatgcgggtgaaccctgacgacggc
aagctgaccctcccgcacatgctgctgccattcaggaaggcgttccgtggaacgttcatt
gttagcggagggtatgaccgcgaggaaggagacgccgcgatcgccaatggctatggcgat
ctggtcgcgtacgggcgtctgtttctcgccaacccggacctgcctgcacggttcgcaagg
aatgccaggctgaacgagtatgacaggagcaccttctacacctccgatccagttgttgga
tacactgattacccgtttctcgatcaattctag
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