Panicum virgatum (switchgrass): 120706956
Help
Entry
120706956 CDS
T07260
Name
(RefSeq) bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like
KO
K13832
3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:
4.2.1.10
1.1.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120706956
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
120706956
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.25 shikimate dehydrogenase (NADP+)
120706956
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.10 3-dehydroquinate dehydratase
120706956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHquinase_I
Shikimate_dh_N
Shikimate_DH
SDH_C
FAD_binding_2
F420_oxidored
Sacchrp_dh_NADP
KARI_N
AdoHcyase_NAD
NAD_binding_2
GIDA
adh_short
2-Hacid_dh_C
Pyr_redox_2
DAO
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
120706956
NCBI-ProteinID:
XP_039847649
LinkDB
All DBs
Position
5K:22527087..22539210
Genome browser
AA seq
509 aa
AA seq
DB search
MTLLCVPLVARTVEEMVADAAAAAAAGADLVEIRLDFIQEFRPREHLPQLLRGCTLPALV
TYRPTWEGGQYEGDDTTRFDTLRLAMELGVDYVDVELKVADKFMSFISGNKPDKCKLIVS
SHNYEHTPSCEELANLVARIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMS
ERGLMSRVLASKFGGYLTFGILNSAKTSAPGQPTVEELLDVYNIRCIGPDTKVLGLIANP
VKQSKSPILHNKCLQYVGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCC
NEHDPVAQSIGAINTIIRRPDGKLVGYNTDYIGAISAIEDGIGGPGSKDAAISPLAGRLI
VVVGAGGAGKAIAYGAKEKGARVVVANRTYEKAVSLANAIGGQALRLADLETFRPEEGMI
LANATSLGMQPNIDGTPIPKKALSFYDVVFDAVYAPKVTRLLREAEECGVKVVSGVEMFI
RQAMGQFEHFTGGIEAPESLMREIAAKYT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgttgtgcgtgccgctggtggcgcggacggtggaggagatggtggccgacgcg
gcggccgccgcggccgcgggcgccgacctcgtcgagatccgactcgacttcatccaggag
ttccgcccccgcgagcaccttccgcaactgctacgcggctgcacactcccggccctcgtc
acctaccgacctacctgggaaggaggccaatatgaaggtgatgacaccacaagattcgac
acactacgtttagcaatggaactaggtgtagactatgttgatgttgaactgaaggtcgcc
gacaaattcatgagctttatttctggcaataagccagacaaatgtaaacttattgtttct
tcgcataattatgaacatactccgtcctgtgaggagcttgcaaatcttgtggctagaata
caagcagttggagctgacatagtgaaagttgcaacaactgctaaggatattgtcgatgta
tcacggatgttccaagtgatggttcactgccaagtgcctatgattggactcgtaatgagt
gaaagaggtttaatgtcacgggtgttagcgtcaaagtttggtggatatcttacatttggg
atactaaattctgcaaaaacatcagcacctggacaaccaacagttgaagaattactggat
gtttacaatataaggtgcataggacctgatacaaaggttcttggtcttatagccaaccca
gtaaagcagagcaagagcccaattctgcacaataaatgccttcaatacgttggatataat
gctgtttatcttccacttcttggagataatcttgctagttttctcgagacatattcatct
ccagacttttcaggatttagttgctctcttcctttcaaagtggatgctgtacagtgctgc
aatgaacatgatccagttgctcagtcaataggagcaattaacactataattagaagacct
gatggcaaattagtggggtacaatacagactacattggagcaatatctgctattgaggat
ggtattggaggtccagggtccaaggatgctgccatctcaccgttggctggtaggcttatt
gttgttgtaggtgctggaggtgctggtaaggcaattgcttatggggccaaggagaagggt
gcaagggtagttgtagcaaatcgtacctatgaaaaggcagtaagtcttgccaatgcaatt
ggaggtcaggccctgagattagcagacctggaaactttcaggcctgaagaagggatgatc
cttgccaatgcaacatcattggggatgcaaccaaatattgatgggactcctattccaaag
aaagcactgagtttctacgatgtggtattcgatgctgtatatgccccaaaggttactcgg
cttctacgagaagcagaagaatgtggtgttaaagttgttagtggtgtggaaatgtttatt
agacaagccatgggtcaatttgaacatttcaccggtggtatagaagctcctgaaagtcta
atgcgggaaatagcagcgaaatacacctag
DBGET
integrated database retrieval system
