Panicum virgatum (switchgrass): 120707033
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Entry
120707033 CDS
T07260
Name
(RefSeq) fimbrin-2-like
KO
K17275
plastin-1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120707033
04147 Exosome [BR:
pvir04147
]
120707033
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120707033
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120707033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
CH_2
CAMSAP_CH
HOOK_N_NuMA
TEDC1
Motif
Other DBs
NCBI-GeneID:
120707033
NCBI-ProteinID:
XP_039847729
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All DBs
Position
5K:28290318..28297174
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AA seq
702 aa
AA seq
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MGFDGLVVVSDPYLQRRFTQADLRALQAQYAALRDASSSGRLRMRDLPAAISSLRGATVS
AKADAENENSAPEPGPGPGLTDEEWASVLKAVARADERPHQDASFELFLRVYAEMQLRLK
SAGAGAGAGGKKAAGGIARSSSSSAVAFLTAATTTLLHTISESEKASYVGHINAYLAEDP
FLRSALPIDPATDHIFHVTKDGVLLCKLINLAVPGTIDERAINTKRVLNLWEKNENHTLC
LNSAKAIGCTVVNIGTQDLAEGRPHLVLGLISQIIKIQLLADVNLKSTPQLVELVEDSKE
MEELMSLSPEKILLRWMNFQLKKGGFQRTVSNFSSDIKDSEAYACLLNVLAPECSAKPSA
MSVKDLLHRARLVLEHADRMGCKRYLTPKDIVDGLPNLNLAFVAHIFQKRNGLSKQMKQV
SFVDGLSDDAQVSREERSFRLWINSLGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWK
MANCPPIKLPFKKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQLMRYNIL
QLLKNLRFHSNGKEITDNDILVWANKKVKDSGKHQSRMESFKDRSLSSGTFFLDLLSAVE
PRVVNWSLVTKGEKDEEKQMNASYIISVARKLGCSIFLLPEDILEVNQKMMLTLTASIMY
WYLKRPTSHSLDSENGSSCETSSTTTSDDSASESSFDDNAAR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgacgggctggtggtggtgtccgacccctacctgcagcgccgcttcacgcag
gccgacctccgcgcgctccaggcccagtatgcggcgctacgggacgcgtcatccagcggg
aggttgcggatgcgggacctccccgccgccatctccagcctccgcggcgccaccgtctcg
gccaaggccgacgccgagaacgagaacagcgcgccagaaccaggccccggcccgggcctc
accgatgaggaatgggcctccgtgctcaaagccgtcgcgcgcgccgacgagaggccgcac
caggacgccagcttcgagctcttcctccgcgtctacgccgagatgcagcttcgcctaaaa
tcggccggcgccggcgccggcgccggcgggaagaaggcggccggcggcatcgcccgctcc
tcgtcctcctccgccgttgccttcctcacggcggccaccaccacgctgctgcacaccatc
agcgagtccgagaaggcgtcctacgtcggccacatcaacgcatacctcgctgaggatccg
ttccttaggagcgcgctccccatagatccggcaaccgatcacatcttccacgtcaccaag
gacggcgtcctcctatgcaagcttattaacttggccgtaccgggcaccattgacgagagg
gccatcaacaccaagagggtgctcaatctatgggagaagaacgagaatcatacactttgc
ctcaactccgccaaggccattggctgcactgtcgtcaacatcggcacacaggacctcgcg
gaagggaggcctcatcttgtcctgggcttaatttctcaaataatcaagatacaactgttg
gcagatgttaacctgaaaagtacacctcagttggttgaattagttgaggacagcaaggag
atggaggagcttatgagtttgtctcctgaaaagattctattaaggtggatgaactttcaa
ctgaagaagggaggcttccagagaacagtatcaaacttttcatcggatataaaagacagt
gaagcgtatgcgtgtctattgaatgtcctggcacctgagtgcagtgcaaaaccatccgca
atgtcagtaaaagatctgcttcatagagcaagattagtccttgagcatgcagataggatg
ggctgcaaaagatacctgactccaaaagacatagttgatggtttaccaaatctaaacctt
gcatttgtggctcatattttccagaaaagaaatgggttgtccaaacagatgaaacaagtt
tcctttgtggatggactctctgatgatgctcaagtttccagggaagaaaggtcattccgg
ctgtggattaacagccttggaatttccacttacatcaacaacgtatttgaagaccttaga
aatggatgggttctccttgaggtgattgacaagattgctcctggctcagttaactggaag
atggcaaattgtccgccaataaaactaccgttcaagaaagttgaaaactgcaaccaagtt
ttgaagatcggaaaagaattgaagttttccctggtgaatattgctggaaatgatattgtg
caagggaacaagaaactgatattagcttttctatggcaattgatgcggtacaacattctt
caactgctgaagaatcttagatttcactcaaatggaaaagagatcacagataatgacata
ttggtatgggccaataaaaaagtaaaagattctggaaagcaccaatctcgtatggaaagt
ttcaaggatagaagcctttcaagtggcacctttttccttgacttactaagtgctgtggag
cctcgagttgtgaattggagccttgtgacgaaaggagaaaaagatgaagagaagcaaatg
aatgcttcatacatcatttctgtggctaggaagcttggttgctccattttcttgttgcca
gaagatatattggaggtgaaccagaaaatgatgctaactctgacagcaagcatcatgtac
tggtatttgaaaaggccaacatcacattcattagactctgaaaatgggagttcatgtgag
acaagctctaccacaacttcagacgattctgcatctgaatcatcattcgatgacaatgca
gctagatag
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