Panicum virgatum (switchgrass): 120707045
Help
Entry
120707045 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase RIO1-like
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120707045
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120707045
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120707045
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120707045
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
RIO family [OT]
120707045
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Kinases
120707045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase_fungal
B3R
TCAD9
Motif
Other DBs
NCBI-GeneID:
120707045
NCBI-ProteinID:
XP_039847748
LinkDB
All DBs
Position
5K:28597122..28602432
Genome browser
AA seq
546 aa
AA seq
DB search
MAHDATSEPKEWSDTDLDDASDTEVGDALDWLDAVEGPDGSARPSAVFSAAGGAGAARRP
NAHGGVLSRPLQPLSNRTQKLASHIRAAPLEEWEGRMNVGMSNSVTTAIRDSIRETTIGK
IRNTEKADRATVEQAIDPRTRMVLFKMLNRGVFNNINGCISTGKEANVYHATKVEGQELA
IKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRVRAAGIRCPK
PLLLRLHVLVMEFIGRGGWAAPRLKDAALSDDKLRESYFEIITTMRTLYQKCKLVHGDLS
EYNILYFEGHLYIIDVSQSVDLDHPSALDFLKEDCLHVSDFFKKRGIAVMTVTDLFNFVI
DQNIADEDVDGYLDKVQQKIVENGGTDTNDEICPTVMVQTLDYVKQCEADLVNMSMMQRS
SFGYEPPADKLYDQPLLGFVRTKNAHAENQQKQLPQNIMEETLDLQNKCSLEDKVEDQED
NSESCSSSDEDSSWEEAPKMGPEERKTARKENKKKVKEEKREARKTKIPKAEKKKRKKMA
KAKCKR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgacgccacgtccgagcctaaggagtggtcggacaccgacctcgacgacgcc
tcggacaccgaggtgggcgacgccctggactggctggacgccgtggagggccccgacggc
tcggcgcggccctccgcggtgttctctgccgccggtggcgcgggcgcggcgcgcaggccc
aacgcgcacggcggcgtgctctcccgccccctccagccgctctccaaccgtacccagaag
ctcgcctcacacatccgcgcggcgcccttggaggagtgggaaggtaggatgaacgtgggg
atgtccaattcggtaactaccgctatcagggatagcataagggaaacaacaattgggaag
ataaggaacacggagaaagctgaccgtgctacagtggaacaggctattgacccaagaaca
cgcatggttttgttcaagatgttaaatcgtggtgtttttaataacataaatggttgcatc
tctacagggaaagaggcaaatgtctatcatgcaacaaaggtggagggtcaggagttagca
attaaagtctacaaaacctctgtccttgtttttaaggatcgcgaccggtatgttcaagga
gattatcgttttaggcatggttactgcaagcataatccacggaaaatggttaagacctgg
gctgaaaaggaaatgagaaaccttctacgagtgagagcagctggaatcagatgccctaaa
ccgttgctattgaggcttcatgtattggtgatggaattcatagggagaggaggttgggct
gctcctcgtcttaaggatgctgctttgtcagatgacaagttgcgtgaaagttactttgag
ataattacaacaatgcggacactttaccaaaagtgcaagttggtccatggagatttgagt
gagtacaacattctttatttcgagggccacttgtacattattgatgtttcacaatctgtt
gaccttgatcacccttcagcattggacttcttaaaggaagattgcctgcatgtttctgac
ttctttaagaaacgaggcattgcagtcatgacggtaacagatttatttaattttgttatt
gaccaaaacattgctgatgaggatgttgatggttacctggataaggttcagcaaaagatc
gtggaaaatggtggtacagatacaaatgatgaaatttgtccaacagtcatggtgcaaact
ttggattatgtgaagcaatgcgaggcagatttagtcaacatgtcaatgatgcaacgctca
tcctttggttacgagccaccagcggataagctttatgaccaaccactattaggatttgta
cggacgaaaaatgcacacgctgaaaatcagcaaaaacaattgccacagaatataatggaa
gaaaccttggatctgcaaaataagtgctcattggaggacaaagtggaagatcaagaggac
aatagtgaatcttgctcaagttctgatgaagacagttcgtgggaggaggctcccaaaatg
ggacccgaggaaaggaagactgctcggaaagagaacaagaagaaggtgaaggaagagaag
agagaagctcgcaagacaaagatcccaaaggctgagaagaagaaaaggaagaaaatggca
aaagcaaagtgcaagcgttag
DBGET
integrated database retrieval system
