Panicum virgatum (switchgrass): 120707072
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Entry
120707072 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP5-like isoform X1
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120707072
04141 Protein processing in endoplasmic reticulum
120707072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120707072
04131 Membrane trafficking [BR:
pvir04131
]
120707072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120707072
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
120707072
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120707072
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120707072
Autophagy
ER-phagy
ER stress-related proteins
120707072
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120707072
Exosomal proteins of other body fluids (saliva and urine)
120707072
Exosomal proteins of colorectal cancer cells
120707072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
120707072
NCBI-ProteinID:
XP_039847781
LinkDB
All DBs
Position
5K:29881620..29883772
Genome browser
AA seq
665 aa
AA seq
DB search
MALLARVLFALLVANLVVAPIYAAPAAQGAAADKTNGTVIGIDLGTTYSCVGVYRNGHVE
IIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANPERTIYDAKRLIGRQFADAVVQRD
MKLLPYAVVDRNGKPHVRVQVRDGDVREFSPEEVSAMVLAKMKETAEAYLGEKVTHAVVT
VPAYFNDAQRQATKDAGVIAGLTVLRTVNEPTAAAIAYGIDKKDGAERNVLVFDLGGGTF
DVSVLAIDNGVFEVLATNGDTHLGGEDFDQRVMDYFIKLIRRKHGRDISGDARALGKLRR
ECERAKRALSNQHQVRVEVEALFDGVDFSEQMTRARFEELNNDLFRRTMVPVKKAMADAG
LKKADINEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAYGAAVQASILSGHVD
NKTKDVILLDVAPLTLGMETAGGVMTKLIARNTVVPTKKTQVFTTYQDRQTTVSIKVFEG
ERSMTKDNRLLGRFDLAGIPPAPRGTPQIEVTFEVDANGILHVQAADKGTGKSEKITITS
DGRRHSQEEIDRMVREAEEFAEEDRKVRERVDARNKLETYVYQVRSAVDGSKMADTMDAE
EKEKVEEAVREANEWLDGNADAEKEEYEEKLKELEDVCNPVISAVYQRSAGIGEDNNDED
DHDEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcctggctcgcgttctgttcgcgctacttgtcgccaatctcgtcgtggccccg
atctacgccgcaccggcggctcaaggagcggcggcggacaagaccaacggcaccgtcatc
ggcatcgacctgggcaccacctactcctgcgtcggcgtctaccggaacggccacgtcgag
atcatcgccaacgaccagggcaaccggatcacgccctcctgggtcgccttcaccgacggc
ggcgagcgcctcatcggcgaggccgccaagaaccaggcggcggccaacccggagcgcacc
atctacgacgccaagcggctcatcggccgccagttcgccgacgccgtggtgcagcgcgac
atgaagctgctgccctacgccgtcgtcgaccgcaacgggaagccgcacgtgcgcgtccag
gtcagggacggcgacgtgcgggagttcagccccgaggaggtgagcgccatggtgctcgcc
aagatgaaggagaccgccgaggcctacctcggcgagaaggtcacgcacgccgtcgtcacc
gtcccggcctacttcaacgacgcgcagcgccaggccaccaaggacgccggcgtcatcgcc
ggcctcaccgtgctccgcaccgtcaacgagcccaccgcggccgccatcgcctacggcatc
gacaagaaggacggcgccgagaggaacgtcctcgtcttcgacctcggcggcggcacgttc
gacgtcagcgtcctggccatcgacaacggcgtcttcgaggtgctcgccaccaacggcgac
acccacctcggcggcgaggacttcgaccagcgcgtcatggattacttcatcaagctcatc
aggcgcaagcacggccgcgacatctccggcgacgcccgcgcgctggggaagctgcgccgc
gagtgcgagcgcgccaagcgcgcgctcagcaaccagcaccaggtgcgcgtcgaggtcgag
gcactcttcgacggcgtcgacttctcggagcagatgactagggcgcgcttcgaggagctc
aacaacgacctgttccggcggacgatggtgcccgtgaagaaggccatggcggacgccggc
ctgaagaaggccgacatcaacgagatcgtgctcgtcggcggcagcaccaggatccccaag
gtgcagcagctgctcaaggactatttcaacggcaaggagcccaacaagggggtcaaccct
gacgaggccgtcgcgtacggcgccgccgtccaggccagcatcctcagcgggcacgtcgac
aacaaaaccaaagatgtgatcctcctcgacgttgcgccgctgacgctgggcatggagacc
gccggcggggtgatgaccaagctgatcgcgaggaacacggtggtgccgacgaagaagacg
caggtgttcaccacgtaccaggacaggcagaccacggtgtccatcaaggtgttcgagggc
gagcggagcatgaccaaggacaaccggctgctcggcaggttcgacctcgccgggatcccg
ccggcgcccaggggcacgccgcagatcgaggtgaccttcgaggtggacgccaacggcatc
ctccacgtgcaggcggcggacaagggcaccggcaagtcggagaagatcaccatcaccagc
gacggccgccggcacagccaggaggagatcgaccggatggtgcgcgaggcggaggagttc
gcggaggaagaccggaaggtgagggagcgggtcgacgcgcgcaacaagctggagacgtac
gtctaccaggtcaggagcgcggtggacggcagcaagatggcggacacgatggatgctgag
gagaaggagaaggtggaggaggcagtcagggaagcgaacgagtggctggacggcaacgcg
gatgctgagaaggaggagtacgaggagaagctcaaggaactggaggatgtctgcaaccct
gtcatctcggcggtgtaccagaggtccgccggtataggggaggacaacaacgatgaggat
gatcatgatgagctttaa
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