Panicum virgatum (switchgrass): 120707072
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Entry
120707072 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein BIP5-like isoform X1
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120707072
04141 Protein processing in endoplasmic reticulum
120707072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120707072
04131 Membrane trafficking [BR:
pvir04131
]
120707072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120707072
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
120707072
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120707072
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120707072
Autophagy
ER-phagy
ER stress-related proteins
120707072
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120707072
Exosomal proteins of other body fluids (saliva and urine)
120707072
Exosomal proteins of colorectal cancer cells
120707072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
Motif
Other DBs
NCBI-GeneID:
120707072
NCBI-ProteinID:
XP_039847781
LinkDB
All DBs
Position
5K:29881620..29883772
Genome browser
AA seq
665 aa
AA seq
DB search
MALLARVLFALLVANLVVAPIYAAPAAQGAAADKTNGTVIGIDLGTTYSCVGVYRNGHVE
IIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANPERTIYDAKRLIGRQFADAVVQRD
MKLLPYAVVDRNGKPHVRVQVRDGDVREFSPEEVSAMVLAKMKETAEAYLGEKVTHAVVT
VPAYFNDAQRQATKDAGVIAGLTVLRTVNEPTAAAIAYGIDKKDGAERNVLVFDLGGGTF
DVSVLAIDNGVFEVLATNGDTHLGGEDFDQRVMDYFIKLIRRKHGRDISGDARALGKLRR
ECERAKRALSNQHQVRVEVEALFDGVDFSEQMTRARFEELNNDLFRRTMVPVKKAMADAG
LKKADINEIVLVGGSTRIPKVQQLLKDYFNGKEPNKGVNPDEAVAYGAAVQASILSGHVD
NKTKDVILLDVAPLTLGMETAGGVMTKLIARNTVVPTKKTQVFTTYQDRQTTVSIKVFEG
ERSMTKDNRLLGRFDLAGIPPAPRGTPQIEVTFEVDANGILHVQAADKGTGKSEKITITS
DGRRHSQEEIDRMVREAEEFAEEDRKVRERVDARNKLETYVYQVRSAVDGSKMADTMDAE
EKEKVEEAVREANEWLDGNADAEKEEYEEKLKELEDVCNPVISAVYQRSAGIGEDNNDED
DHDEL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcctggctcgcgttctgttcgcgctacttgtcgccaatctcgtcgtggccccg
atctacgccgcaccggcggctcaaggagcggcggcggacaagaccaacggcaccgtcatc
ggcatcgacctgggcaccacctactcctgcgtcggcgtctaccggaacggccacgtcgag
atcatcgccaacgaccagggcaaccggatcacgccctcctgggtcgccttcaccgacggc
ggcgagcgcctcatcggcgaggccgccaagaaccaggcggcggccaacccggagcgcacc
atctacgacgccaagcggctcatcggccgccagttcgccgacgccgtggtgcagcgcgac
atgaagctgctgccctacgccgtcgtcgaccgcaacgggaagccgcacgtgcgcgtccag
gtcagggacggcgacgtgcgggagttcagccccgaggaggtgagcgccatggtgctcgcc
aagatgaaggagaccgccgaggcctacctcggcgagaaggtcacgcacgccgtcgtcacc
gtcccggcctacttcaacgacgcgcagcgccaggccaccaaggacgccggcgtcatcgcc
ggcctcaccgtgctccgcaccgtcaacgagcccaccgcggccgccatcgcctacggcatc
gacaagaaggacggcgccgagaggaacgtcctcgtcttcgacctcggcggcggcacgttc
gacgtcagcgtcctggccatcgacaacggcgtcttcgaggtgctcgccaccaacggcgac
acccacctcggcggcgaggacttcgaccagcgcgtcatggattacttcatcaagctcatc
aggcgcaagcacggccgcgacatctccggcgacgcccgcgcgctggggaagctgcgccgc
gagtgcgagcgcgccaagcgcgcgctcagcaaccagcaccaggtgcgcgtcgaggtcgag
gcactcttcgacggcgtcgacttctcggagcagatgactagggcgcgcttcgaggagctc
aacaacgacctgttccggcggacgatggtgcccgtgaagaaggccatggcggacgccggc
ctgaagaaggccgacatcaacgagatcgtgctcgtcggcggcagcaccaggatccccaag
gtgcagcagctgctcaaggactatttcaacggcaaggagcccaacaagggggtcaaccct
gacgaggccgtcgcgtacggcgccgccgtccaggccagcatcctcagcgggcacgtcgac
aacaaaaccaaagatgtgatcctcctcgacgttgcgccgctgacgctgggcatggagacc
gccggcggggtgatgaccaagctgatcgcgaggaacacggtggtgccgacgaagaagacg
caggtgttcaccacgtaccaggacaggcagaccacggtgtccatcaaggtgttcgagggc
gagcggagcatgaccaaggacaaccggctgctcggcaggttcgacctcgccgggatcccg
ccggcgcccaggggcacgccgcagatcgaggtgaccttcgaggtggacgccaacggcatc
ctccacgtgcaggcggcggacaagggcaccggcaagtcggagaagatcaccatcaccagc
gacggccgccggcacagccaggaggagatcgaccggatggtgcgcgaggcggaggagttc
gcggaggaagaccggaaggtgagggagcgggtcgacgcgcgcaacaagctggagacgtac
gtctaccaggtcaggagcgcggtggacggcagcaagatggcggacacgatggatgctgag
gagaaggagaaggtggaggaggcagtcagggaagcgaacgagtggctggacggcaacgcg
gatgctgagaaggaggagtacgaggagaagctcaaggaactggaggatgtctgcaaccct
gtcatctcggcggtgtaccagaggtccgccggtataggggaggacaacaacgatgaggat
gatcatgatgagctttaa
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