Panicum virgatum (switchgrass): 120707081
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Entry
120707081 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA synthase 5-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00062
Fatty acid elongation
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04626
Plant-pathogen interaction
Module
pvir_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
120707081
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120707081
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
120707081
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Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
DUF4175
Motif
Other DBs
NCBI-GeneID:
120707081
NCBI-ProteinID:
XP_039847793
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Position
5K:30528438..30530189
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AA seq
496 aa
AA seq
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MAPLASSSKAKALKASYELVVNNFLAVVAVASLATVLRTAGFDGLYGQLQAARPVHVLTA
VILAAALVKLRRVRRPRDVYLVEYGCFRPKPWFRAPYATCLEHVRLMPYLAKEEDVAWGR
RLLLRSGIGEETCVPYAYHYVPPDRSVEASRDETELVIFSAVDDVFARTAVRPADIDVVV
ANCSIFTPTPVFADMVVSRYKLRADVRSVNLSGMGCSAGLISLQLAKNLLQVAPPGTHVL
VVSTEILSSQYYVGSKREMLLPNCLFRMGAAAMILSNSPERARFRLVRTVRTVAAALDAG
YRCVFQEEDDEGNMGVRLSKDLVTTAGQTLKSNIVAFGPLVLPVSEQLLVALSLLKRKLL
TSLRRGSGKVRLYRPDFRTAFEHFCIHAGGRAVIDEVQRGLGLSDDDVEASRMTLHRFGN
TSSSSVLYELAYIEAKGRMKKGDRVWMISFGAGFECSSAAWECIKPAADADGPWISCIHR
YPVQLPNKVIEGNEII
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctggcctcgtctagcaaggccaaggccctcaaggcgtcgtacgagctcgtc
gtcaacaacttcctcgccgtcgtcgcggtggcttctctcgccactgtgctccggacggca
ggcttcgatggcctttacggccagctgcaagcggcgcggccagtccacgtcctcacggcg
gtgatcctggcggccgccctcgtcaagctcaggcgcgtgcgccggccacgggacgtgtac
ctcgtcgagtacggctgcttccggccgaagccgtggttccgggcgccgtacgccacgtgc
ctggagcacgtgcgcctcatgccgtacctggccaaagaggaagacgtcgcctggggacgg
cgcctgctcctgcggtccggcatcggcgaggagacctgcgtgccgtacgcctaccactac
gtgccccctgaccgcagcgtcgaggcctcccgggacgagaccgagctggtcatcttctcc
gccgtcgacgacgtgttcgccaggacggccgtgaggcccgcggacatcgacgtggtcgtc
gccaactgcagcatcttcacgcccacgccggtgttcgccgacatggtcgtcagcaggtac
aaactgcgcgccgacgtgcggagcgtgaacctgtccgggatggggtgcagcgcggggctc
atctccctccagctcgccaagaacctcctgcaggtggcgccgccgggcacgcacgtgctg
gtcgtgtccacggagatcctctcgtcgcagtactacgtcggcagcaagcgcgagatgctg
ctgcccaactgcctcttccgcatgggcgccgccgccatgatcctctccaactccccagaa
cgcgcccggttccggctcgtgcgcacggtccgtaccgtggccgccgcgctggacgcgggc
taccgctgcgtgttccaggaggaggacgacgaaggcaacatgggggtccgtctctccaag
gacctcgtcaccactgccggccaaacgctcaaaagcaacatcgtggccttcggcccgctc
gtccttccggtctcggagcagctcctcgtcgcgctctcgctcctcaagcggaagctcctg
acgagcctgcggcgcgggagcggcaaggtgaggctgtaccgcccggacttccgcacggcg
ttcgagcacttctgcatccacgccggcgggcgcgcggtgatcgacgaggtgcagcgcggc
ctcggcctctccgacgacgacgtggaggcgtcgcggatgacgctgcaccggttcggcaac
acgtcgagcagctcggtgctgtacgagctggcctacatcgaggccaagggccggatgaag
aagggcgaccgggtgtggatgatctccttcggcgcggggttcgagtgcagcagcgcggcg
tgggagtgcatcaagccggcggccgacgccgacgggccatggatcagctgcatccaccgc
taccccgtacagctccctaataaggtcatagagggaaacgaaataatctaa
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