Panicum virgatum (switchgrass): 120707090
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Entry
120707090 CDS
T07260
Name
(RefSeq) conserved oligomeric Golgi complex subunit 4-like
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120707090
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
120707090
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Gene cluster
GFIT
Motif
Pfam:
COG4_m
COG4_C
COG4_N
RINT1_TIP1
ZW10_C2
Motif
Other DBs
NCBI-GeneID:
120707090
NCBI-ProteinID:
XP_039847800
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Position
5K:complement(30696134..30700697)
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AA seq
762 aa
AA seq
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MAVPSPSPTPRSPRRPEVIVALEPSIVDAQPPLDFGDPACLAALRALTDAGAATRLLHEC
VAYQRALDARLDSLLACRADIDRAAASLLRSAPPLLSLAASDAAALKESSSSTAALADAL
SSRVRHLDAAHSRADAALARAEAALDRSRALEAARRALAADDLVAAATAAHEFLTIDARF
PTDDNLRRDLLDIKRRLEGLARRRLAAAVDAQDHPAVLRLVSLFPLLALADEGLQVYVAY
LKKVVTLRARADFEHLADLTSATQPTSERPDFVGCLTRLFKDIVLAVEENDAVLRELKGE
DGVAYAIIELQEECDSRGSQILRRYADYRKLARLASDINSYTKNLLSVVGSMASAAGGNE
GPDPREIELYLEEILALTQLGEDYTEFMVNKIRALRDVKPELGPQAMKAFRNGSFNKMEQ
DLTGFYVIFEEFFMVENVRKAIRIDEHVPDGLTTSMVDDVFYVLQSCCRRAASTASINSV
LAVLGGATSLLSNEYQEALQWRMREPNLGAKLFLGGVGVQKTGEEIATALNNMDISSEYV
LKLRHEIEELCAEVFHAPADREKIKSCLSELGDISASFKKILHSGMEHLVASVAPRIRPV
LDTVATVSYELDDAEYGENEVNDPWVQKLILAVNTNVAWLQPVMTSNNYDSFVHLIIDFI
VKRLEVIMMQKRFSQLGGLQLDKEVRSLINHFSEMSQRPVRDKFSRLSQMSTILNFERVS
EILDFWGDNAGHLTWLLTPAEVRRVLGLRIDFRPEAIAALRL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccgtcgccctctcccaccccgcgctccccgcgccgcccggaggtcatcgtg
gccctggagccctcaatcgttgacgcgcagccgcccctcgacttcggcgacccggcctgc
ctcgccgcgctccgtgcgctgaccgacgctggcgccgccacccgcctcctgcacgagtgc
gtcgcctaccagcgcgcccttgacgcccgcctcgattctctcctcgcctgccgggccgac
atcgaccgcgctgccgcctcactcctccgctcggccccgccgctgctctcgctcgcggcc
tccgacgccgccgcgcttaaggagtcctcctcttccacagcggcgctcgccgacgcgctc
tcctcccgtgtccgccacctcgacgcggcgcattccagggcggatgccgcgctggcgcgc
gccgaggctgcgcttgatcggtcccgcgcgctcgaagcagcacggcgggccttggccgct
gacgatctcgtcgcggccgccacagccgcgcacgaattcctcaccatcgacgcacggttc
cccaccgacgacaacctccgccgtgacctgctagacatcaagcgccgcctcgaggggctc
gcgcgacggaggctcgctgctgcggttgacgcacaggaccaccctgctgtgctccgactc
gttagcctattcccactcctggcgctcgctgatgagggactccaggtctatgtcgcttac
ctgaagaaggtggtcacacttcgtgcccgtgcagactttgagcacctcgccgatctcacg
tctgcaacccagccaacctctgagcggccagattttgtcggctgcctcactcgtctcttc
aaggacattgtgctcgctgttgaggagaatgatgctgtgcttcgcgagctcaagggtgaa
gatggtgttgcttatgccatcattgagctgcaagaggagtgtgattcgcggggctcccag
atcctacgccggtatgctgattacaggaagctcgcacgtcttgcatcggatattaactcc
tatacaaagaacctcctttcagttgtgggttccatggccagtgctgctggaggtaacgaa
gggcctgatcccagggaaattgagctttatcttgaggagattcttgcattaacacagctt
ggagaagactacactgaatttatggtgaataagatccgtgcattgagagatgtcaagccc
gaacttgggccgcaggcgatgaaggcctttcgtaatggtagctttaataaaatggagcag
gatctgactgggttctatgtgatctttgaggagtttttcatggtggagaatgtaaggaaa
gccatacggattgatgagcatgtaccagatggtctcacaacctcaatggtggacgacgta
ttctatgtactgcagagttgctgccgtcgggctgcatccactgcaagtattaactcggtt
cttgctgtgcttggtggggcaacgagccttctgagcaatgagtatcaggaggcactacag
tggaggatgcgggagccaaatttgggtgctaaactgttccttggtggtgttggagtccag
aaaactggtgaggagattgcgactgcactaaacaacatggatatcagctctgaatatgtt
ctcaagctccgtcatgagattgaggagctctgtgcggaggtttttcatgctccagctgac
cgagagaagatcaaatcctgtttatcagagctaggagatatcagtgcttccttcaagaag
atccttcattctggaatggagcatttggtggcatctgtggcaccgcgcattcgtccagtc
cttgacactgttgctactgtcagttatgagctggatgatgctgaatatggggaaaatgag
gtgaacgacccatgggtgcagaagcttatacttgcagttaacactaatgttgcttggctc
cagccagtgatgacatcaaacaactacgattcctttgtgcacttaatcatcgacttcata
gtcaagaggctcgaggtgatcatgatgcagaagaggttcagccagcttggtgggcttcag
ctagacaaagaggtccgttctttgatcaaccatttctcagaaatgtcccagagaccggtc
cgagacaagttctcaaggctttcccagatgtcgaccattcttaactttgagcgtgtatcg
gagatactggatttctggggtgacaatgctggtcatctgacatggctgttgacacccgca
gaggtgcgaagggtattaggacttaggattgacttcaggcctgaagccattgctgctctg
aggctctaa
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