Panicum virgatum (switchgrass): 120707116
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Entry
120707116 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase RIO1-like
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120707116
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120707116
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120707116
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120707116
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
RIO family [OT]
120707116
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Kinases
120707116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase_fungal
B3R
TCAD9
Motif
Other DBs
NCBI-GeneID:
120707116
NCBI-ProteinID:
XP_039847830
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All DBs
Position
5K:complement(31536403..31542622)
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AA seq
547 aa
AA seq
DB search
MAHDATSEPEEEWSDTDLDDASDTEVGDALDWLDAVEGPDGSARPFAAFSAAGGAGAARR
PNAHGGVVSRPLQPLSNRTQKLASHIRAAPLEEWEGRMNVGMSNSVTTAIRDSIRETTIG
KIRNTEKADRATVEQAIDPRTRMVLFKMLNRGVFNNINGCISTGKEANVYHATKVEGQEL
AIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRVRAAGIRCP
KPLLLRLHVLVMEFIGRGGWAAPRLKDAALSDDKLRESYFEIITTMRTLYQKCKLVHGDL
SEYNILYFEGHLYIIDVSQSVDLDHPSALDFLKEDCLHVSDFFKKRGIAVMTVTDLFNFV
IDQNIADEDVDGYLDKVQQKIVENGGTNTNDEICPTVMVQTLDYVKQCEADLVNMSMMQR
SSFGYEPPADKLYDQPLLGFVRTKNAHAENQQKQLPQNTMEETLDLQNKCSLEDKVEDQE
DNSESCSSSDEDSSWEEAPKMGPEERKTARKENKKKVKEEKREARKTKIPKAEKKKRKKM
AKAKCKR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgacgccacgtccgagcctgaggaggagtggtcggacaccgacctcgacgac
gcctcggacaccgaggtgggcgacgccctggactggctggacgccgtggagggccccgac
ggctcggcgcggcccttcgcggcgttctctgctgccggtggcgcaggcgcggcgcgcagg
cccaacgcgcatggcggcgtggtctcccgccccctccagccgctctccaaccgcacccag
aagctcgcctcacacatccgtgcagcgcccttggaggagtgggaaggtaggatgaacgtg
gggatgtccaattcggtaactaccgctatcagggatagcataagggaaacaacaattggg
aagataaggaacacggagaaggctgaccgtgctacagtggaacaggctattgacccaaga
acacgcatggttttgttcaagatgttaaatcgtggtgtttttaataacataaatggttgc
atctctacagggaaagaggcaaatgtctatcatgcaacaaaggtggagggtcaggaatta
gcaattaaagtctacaaaacctctgtccttgtttttaaggatcgcgaccggtatgttcaa
ggagattatcgttttaggcatggttactgcaagcataatccacggaaaatggttaagacc
tgggctgaaaaggaaatgagaaaccttctacgagtgagagcagctggaatcagatgccct
aaaccgttgctattgaggcttcatgtattggtgatggaattcatagggagaggaggttgg
gctgctcctcgtcttaaggatgctgctttgtcagatgacaagttacgtgaaagttacttt
gagataattacaacaatgcggacactttaccaaaagtgcaagttggtccatggagatttg
agtgagtacaacattctttatttcgagggccacttgtacattattgatgtttcacaatct
gttgaccttgatcacccttcagcattggacttcttaaaggaagattgcttgcatgtttct
gacttctttaagaaacgaggcattgcagtcatgacggtaacagatttatttaattttgtt
attgaccaaaacattgctgatgaggatgttgatggttacctggataaggttcagcaaaag
atcgtggaaaacggtggtacaaatacaaatgatgaaatttgtccaacagtcatggtgcaa
actttggattatgtgaagcaatgcgaggcagatttagtcaacatgtcaatgatgcaacgc
tcatcctttggttacgagccaccagcagataagctttatgaccaaccactattaggattt
gtacggacgaaaaatgcacacgctgaaaatcagcaaaaacaattgccacagaatacaatg
gaagaaaccttggatctgcaaaataagtgctcattggaggacaaagtggaagatcaagag
gacaatagtgaatcttgctcaagttctgatgaagacagttcgtgggaggaggctcccaaa
atgggacctgaggaaaggaagactgctcggaaagagaacaagaagaaggtgaaggaagag
aagagagaagctcgcaagacaaagatcccaaaggctgagaagaagaaaaggaagaaaatg
gcaaaagcaaagtgcaagcgttag
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