Panicum virgatum (switchgrass): 120707131
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Entry
120707131 CDS
T07260
Name
(RefSeq) DNA replication licensing factor MCM4-like
KO
K02212
DNA replication licensing factor MCM4 [EC:
5.6.2.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120707131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120707131
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120707131
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
120707131
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
MCM_N
MCM4_WHD
Mg_chelatase
AAA_5
AAA_3
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
120707131
NCBI-ProteinID:
XP_039847860
LinkDB
All DBs
Position
5K:32836325..32841575
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AA seq
855 aa
AA seq
DB search
MASNGGGSSPPPASSPDARPSSPLPVTNSSPTQSTRRSGGRRRRGSASPYASSPSLGGFE
TPPHPGRRTPSGGGAGAARQQRQNWTGRFPLTPSTPMSTDDIPPSSDAGEDETDGGGAGV
DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELQGAE
SLDVDAHDVFDHDPDLYNKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS
ICLRNLNPSDIEKMVSIKGMIIRCSSVIPELKEAVFRCLVCGFYSEPVMVDRGRVTEPHI
CQKEQCKATNSMTLVHNRCRFADKQIIKLQETPDEIPEGGTPHTVSVLMHDKLVDAGKPG
DRVEITGIYRAMSIRVGPAQRTVKSIFKTYIDCLHIKKTDKSRLHVEDNMDIDNADANKS
TNKSTKEDFLSDKVEKLKELSKLPDIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNPLRL
PSGASFRGDINILLVGDPGTSKSQLLQYMHKLSPRGIYTSGRGSSAVGLTAYVTKDPETG
ETVLESGALVLSDKGVCCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVL
ACANPTESRYNPRLSVIDNIHLAPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENP
NLEELEVLDLPTLVAYISYARKYIQPQLSDEAAEELTRGYVEMRKRGNTPGSRKKVITAT
ARQIESLIRLSEALARMRFSEVVEVRDVVEAFRLLEVAMQQSATDHATGTIDMDLIMTGI
SASERQRRENLVAATRNLIMEKMQLGGPSMRMAELLEEMRKQSSMEINLHDLRSALGTLM
TEGAVVIHGDNVKRV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaacggcggcggtagctccccacctcccgcgtcgtcgccggatgctcgcccg
tcgagcccgctgccggtcaccaactcctcccctacccaatccacccgccggtccggcggg
cgccgccgccgcgggtccgccagcccctatgcctcgtccccctccctcggggggttcgag
acgccgccgcaccccggacgccggaccccgtcaggcggcggagccggcgccgcccggcag
cagcgccagaactggactgggcggttcccgctgacgccctccacccccatgtccaccgac
gacatcccgccgtcctccgacgccggggaggacgagaccgacgggggcggcgcgggcgtc
gacgccaccccagtcttcgtctggggcaccaacatcagcgtgcaggacgtcaacgccgcc
atcctccggttcctgcgccactttcgggacccgcgcgacgccggccgggtcgaccctgtg
atggacgagggcaagtacatgcgcgccatccaccgcatcctcgagctccagggcgcggag
tccctcgacgtcgacgcgcacgacgtgttcgaccacgacccggacctctacaacaagatg
gtgcgctacccgctcgaggtgctcgccattttcgacatcgtgctcatggacctcgtcgca
cgcatcgagccactcttcgagaagcacatccagaccagaatctacaacctcaagtcgtca
atttgcttgaggaatcttaatccatctgatattgagaagatggtgtcaataaagggtatg
ataattagatgcagctcggtcataccagagctcaaggaagctgtgttccgctgcctagtt
tgtggtttctactcagagcccgttatggttgatagagggagagtaactgaaccacacatt
tgccagaaagaacaatgtaaagccacaaattctatgaccctagttcacaaccgatgcaga
tttgcagacaagcagataataaagttacaagaaacaccagatgagataccagaaggtggc
actccacatacagttagtgtcctgatgcatgataagcttgttgatgctggaaagcctgga
gatagggttgagatcactggaatatacagggctatgagcattagggttggtcctgctcaa
aggacagtgaagtctatattcaagacgtatattgattgccttcacataaagaagacagac
aaatctaggcttcatgtggaggacaacatggatattgacaatgctgatgctaacaagtct
actaacaagtctactaaagaggacttccttagtgataaggttgagaaactgaaagagctt
tcaaagttgcctgatatctatgatagattgaccagatcattggctccaaacatatgggag
ttggatgacgttaaaagaggcctcctttgccagctttttggtggcaatcccttaaggctt
ccttctggggctagcttccgtggtgacataaatattttacttgtgggtgatcctggaaca
agtaaatcccagcttctccagtacatgcataagctatctcctcgtggtatctatacaagt
ggtagaggaagttctgctgttggtcttactgcttatgttaccaaagatcctgagactggt
gaaactgttcttgagagtggagcactagttttaagtgataaaggtgtttgctgtatagat
gagttcgataagatgtctgataatgcccgaagcatgttgcatgaggtgatggaacaacag
acagtatccattgcaaaggccggaataattgcatctttaaatgctagaacttctgtcctg
gcatgtgcaaatcctaccgaatcacgctacaatccgagactttctgtaatcgacaacatc
catcttgccccaacacttctttcaaggtttgacctgatttatcttatcttggacaaggca
gatgagcaaactgataggcgcctggcaaagcatattgtttcactgcattttgagaaccca
aatttagaagagcttgaggttttggatttgcccacattagttgcctacataagctatgca
aggaagtatattcagccacagttatctgatgaagcggcagaagaattgactcgtggctat
gttgagatgaggaaaagagggaatacccctggaagcagaaagaaggttataactgcaact
gccagacaaatagagagcttgattcgtctcagtgaagcattggcccgaatgcgattctct
gaagtggttgaagtgcgagatgttgttgaggccttcaggcttctcgaagttgccatgcag
cagtctgcgacggatcatgcaacagggacaattgatatggatctaatcatgacgggaata
tctgcgagtgaaaggcagcgacgggagaacctcgttgcagcaacacgcaaccttatcatg
gagaaaatgcagcttggaggcccctcaatgcgtatggctgagttgctggaagaaatgagg
aagcagagctctatggaaattaatctgcacgatcttcgcagcgctcttggtactctgatg
actgaaggtgctgtggttatccatggagacaatgtgaagagggtttga
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