Panicum virgatum (switchgrass): 120707132
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Entry
120707132 CDS
T07260
Name
(RefSeq) myb-related protein Hv33-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120707132
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120707132
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Peptidase_M13_N
HEPN_RiboL-PSP
Motif
Other DBs
NCBI-GeneID:
120707132
NCBI-ProteinID:
XP_039847861
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All DBs
Position
5K:complement(32856777..32858790)
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AA seq
319 aa
AA seq
DB search
MGREAAAAARPKLRRGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLERCGKSCRLRWIN
YLRPDLKRGSFSQQEEDLIISLHKILGNRWSQIASQLPGRTDNEIKNFWNSCIKKKLRQR
GIDPATHKPLEDDAAAAAANSGEAPRDDCNKLLPATADDHCGFAMGGTSSDPLAPHSPTV
SFDPLSVTNVPAMQGSYGAAHSFQPDNLCDYGGAAAYSAAAYTGGGADSSSNSNGTWTCG
NAVGGEPIPQLDMFGREAYHQFDPANKYSPWQQHEAARLHDGLGGAAGFPIRSMSRDLPD
SCFDLTRSGLEDEFSVDFL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgaggcggcggcggcggcgaggcccaagctgcggaggggcctctggtcgccg
gaggaggacgagaagctctacaaccacatcatccggtacggcgtcggctgctggagctca
gtcccaaagctcgcaggcttggagagatgcggcaagagctgcaggctgagatggatcaac
tacctgaggcctgatctcaagaggggcagcttctcccagcaggaggaggacctcatcatc
agcctccacaagatcctaggcaacaggtggtcccagatcgcgtcacagctgcccggccgg
acggacaacgagatcaagaacttctggaactcgtgcatcaagaagaagctccggcagcgg
ggcatcgacccggccacccacaagccgctcgaggacgacgccgccgccgccgccgccaac
agcggggaggcgccacgggacgactgcaacaagctgctcccggcgacagccgacgaccac
tgcggcttcgccatgggcggcaccagcagcgaccctctcgcgccgcactccccgaccgtc
agcttcgacccactctccgtgaccaacgtcccggcaatgcagggctcctacggcgccgcg
cactccttccaaccggacaacctctgcgactacggcggcgccgccgcgtacagcgccgcc
gcctacacgggcggcggcgccgacagctccagcaacagcaacgggacctggacctgcggc
aatgcggtcggcggcgagccgataccgcaattggacatgttcggccgtgaggcgtaccac
cagttcgacccggccaacaagtacagcccctggcagcagcacgaggcggcgaggctccac
gacggcctcggcggcgcggcgggcttcccgatccggtcgatgtcgcgggacctgccggat
tcctgcttcgacctcacccgcagcgggctggaggacgagttcagcgtcgacttcctctga
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