Panicum virgatum (switchgrass): 120707167
Help
Entry
120707167 CDS
T07260
Name
(RefSeq) protein indeterminate-domain 7-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120707167
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120707167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
120707167
NCBI-ProteinID:
XP_039847920
LinkDB
All DBs
Position
5K:35626964..35631010
Genome browser
AA seq
464 aa
AA seq
DB search
MSSSNLTSSASGGPNAAPAAGNKRKRSLPGNPDPDAEVVALSPATLMATNRFVCEICGKG
FQRDQNLQLHRRGHNLPWKLKQRAAGKEAQRKKVYVCPEASCVHHDPARALGDLTGIKKH
FFRKHGEKKWKCDKCSKKYAVHSDWKAHAKICGTREYKCDCGTIFSRRDSFITHRAFCDA
LTEESAKAIGLGAMAAAAAPAHHHPLLFSPPPPQVIQHQVQDLAALQENPHHHHSQVMQP
PQAQQQQQQHCNYAMKTEMPPWPAMAYDHHAHPLLQPLCNAAAGAAQSSATSAPPPPAAS
AHLSATALLQKAAQMGATIGGAGAGAGAHYSQMAGPAASAPGGATFGLGLPGLSAQQQPV
DGGVMGGLARTASRGRSGEDAGGGAGGGGADGMTRDFLGLRAFSHRDILDLAGFDSSCMG
AIAANANMTCYEPQQHAQAEQQQQQQQQQQSSNEPWHGGMGSHS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctccaacctcacctcctccgcctccggcgggccaaacgcggcgccggccgcc
ggcaacaagcgcaagcggagcctcccaggaaaccccgaccccgacgcggaggttgtggcg
ctgtcgccggcgacgctgatggcgacgaaccggttcgtgtgcgagatctgcggcaagggg
ttccagcgcgaccagaacctgcagctccaccggcgcgggcacaacctgccgtggaagctc
aagcagcgggccgccggcaaggaggcgcagcggaagaaggtgtacgtgtgcccggaggcg
tcgtgcgtgcaccacgaccccgcccgcgcgctcggcgacctcaccggcatcaagaagcac
ttcttccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagaagtacgcc
gtccactcagactggaaggcgcacgccaagatctgcggcaccagggagtacaagtgcgac
tgcggcaccatcttctccaggcgggacagcttcatcacgcaccgcgccttctgcgacgcg
ctcaccgaggagagcgccaaggccatcggcctcggcgccatggccgccgccgccgcgccg
gcgcaccaccacccgctgctcttctcccctccgccgccgcaggtcatacagcaccaggtc
caggacctcgccgcgctgcaggagaacccccaccaccaccacagccaggtcatgcagccg
ccgcaagcgcagcagcagcagcagcagcactgcaactacgccatgaagacggagatgccg
ccgtggccggcgatggcgtacgaccatcacgcccacccgctgctgcagccgctatgcaac
gccgccgccggagccgcgcagagctcggccacgtccgcgccgccgccgcccgccgcgtcg
gctcacctctcggccacggcgctgctgcagaaggcggcgcagatgggcgccaccatcggc
ggcgcgggcgccggcgccggcgcgcactactcccagatggcgggccccgcggcgagcgcg
cccggcggcgccaccttcgggctcggcctccctggcctgagcgcgcagcagcagccggtg
gatggcggcgtcatgggtggcctcgcgagaaccgcctcccgtggccgcagcggcgaggac
gccggcggcggcgccggcggcgggggcgccgacggcatgacgagggacttcctgggcctg
cgcgccttctcccaccgcgacatcctcgacctcgccggcttcgactcctcgtgcatgggc
gccatcgccgccaacgccaacatgacctgctacgagccgcagcaacatgcgcaggcggag
cagcagcagcagcagcagcagcagcaacaaagcagcaacgagccatggcacggcggcatg
ggcagccatagctaa
DBGET
integrated database retrieval system
