Panicum virgatum (switchgrass): 120707200
Help
Entry
120707200 CDS
T07260
Name
(RefSeq) 25.3 kDa vesicle transport protein-like
KO
K08517
vesicle transport protein SEC22
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
pvir04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120707200
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120707200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120707200
Membrane trafficking [BR:
pvir04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
120707200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
120707200
NCBI-ProteinID:
XP_039847971
LinkDB
All DBs
Position
5K:complement(36318062..36322457)
Genome browser
AA seq
218 aa
AA seq
DB search
MVKLTMIARVTDGLPLAEGLDAGRDQKDADFYKQQAKLIFKNLSKGHHEASRMSIETGAY
FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSDTRI
YADKAKDLNRQALIRKYAPVAIVIGVVFILFWLKNKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgaccatgatagcgcgtgtcactgatgggcttccactggcagaagggttg
gatgctgggcgagatcagaaggatgctgatttctacaagcagcaagctaaacttattttt
aagaacttgtcaaaagggcatcacgaagcttcccggatgtcaattgagacaggggcctac
tttttccactacatcattgaaggccgagtatgttatctgactatgtgtgaccggtcttat
ccaaagaaacttgcattccagtacctagaagatctgaaaaatgaatttgagagggtcaat
ggcaatcaaatagaaactgctgcaaggccatatgcgtttatcaagtttgatacattcatc
cagaagactaagaaactatatttggatacaagaactcaaaggaaccttgcaaaactgaat
gatgagctctatgaggtgcatcaaattatgacccgcaatgttcaagaggttcttggtgtt
ggtgaaaagctagaccaggtcagtgaaatgtcaagtagattgacatctgacacaagaata
tacgcagataaggcaaaggacctcaatcgacaggccttgatccggaagtatgctccggtt
gcgattgtgattggggtagtcttcattctcttttggctgaagaacaagatatggtga
DBGET
integrated database retrieval system
