Panicum virgatum (switchgrass): 120707240
Help
Entry
120707240 CDS
T07260
Name
(RefSeq) isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120707240
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
120707240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-GeneID:
120707240
NCBI-ProteinID:
XP_039848022
LinkDB
All DBs
Position
1K:complement(39731676..39735401)
Genome browser
AA seq
373 aa
AA seq
DB search
MARRSTSLLRRLLSPSPSPSSPLAGAVSRRTVTYMPRPGDGAPRGVTLIPGDGIGPLVTG
AVRQVMEAMHAPVYFEAYEVHGDMPTVPTEVIESIRRNKVCLKGGLATPVGGGVSSLNVQ
LRKELDLYAALVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITK
FCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGIQYNEIIVD
NCCMQLVAKPEQFDVMVTPNLYGNLVANVAAGIAGGTGVMPGGNVGQDHAVFEQGASAGN
VGNEKIVETKRANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGKYRTKDLGGTST
TQEVTDAVIAKLD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgatcgacctctctcctacgccgcctcctctccccatccccctccccgtcc
tctcccctcgccggcgccgtgtcccgccgcaccgtcacctacatgccccgcccgggtgac
ggcgccccgcgcggcgtcacgctcatcccgggtgatggaatcgggcccctcgtcacgggt
gccgtgcggcaggtgatggaggcgatgcacgcgccggtctacttcgaggcctatgaggtc
cacggcgacatgcccacggtgcccaccgaggtcatcgagtccatccgccgcaacaaggtc
tgcctcaagggcggcctcgccacccccgtcggcggaggtgtctcctccctcaacgtgcag
ctccgcaaggagctcgacctctacgccgcgctcgtcaactgcttcaacctccccggcctg
cccaccaggcacgacaacgtcgacattgtcgtcatcagggagaacaccgagggcgagtac
tcggggctcgagcatgaggtcgtgcccggcgtcgtcgagagtctcaaggtgataacaaag
ttttgctcagaaagaattgccaagtatgcttttgagtatgcataccttaacaatcgaaag
aaagtgacagcagtgcataaagcaaacatcatgaagcttgctgatggtttgttcttggag
tcttgccgtgaggttgcaaagaagtaccctgggattcaatataatgaaatcattgtggat
aactgttgtatgcagcttgttgcgaagcctgaacaatttgatgttatggtcactccaaat
ctttacggcaatctggtggctaatgtagctgcaggtattgctggaggcactggtgtcatg
cctggaggtaatgtgggtcaggaccatgctgtcttcgagcaaggtgcttctgcaggaaac
gtcggaaatgagaagattgtggagacaaagagagctaaccctgttgcgctgctgctctca
tccgctatgatgttgaggcatttgcagttcccatcatttgccgaccggctggagacggca
gtgaagcgtgtcattgcagaaggcaaatacagaaccaaagatttgggtggcaccagcaca
acccaggaagtcacagatgcggtcattgccaaactggattaa
DBGET
integrated database retrieval system
