Panicum virgatum (switchgrass): 120707285
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Entry
120707285 CDS
T07260
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120707285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120707285
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
120707285
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GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120707285
NCBI-ProteinID:
XP_039848096
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Position
5K:37927521..37929047
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AA seq
428 aa
AA seq
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MEDKNARAAVLPVSTLTEPLLPGKGEDLEAAQLPSYGGASFSRTCLNLTNAVSGIGVLSM
PYAVAQGGWLSLALFALVGAICYYTGTLIERCMRADPAAVASYPDIGAFAFGSAGRRAVA
AFMYVELYLVAISFLVLEGDNLDKLFSGATVDLLGYRLQGKQLFIALAASVVLPTTWLKN
LGVLAYVSAVGLVSSAVLTVSLVWAGLAGTGFHRNSTSVLNLSGLPTSLGLYFVCFTGHA
VFPTIYSSMRNNKHFSKVLLISSVLCSVNYGLTAMLGYMIYGDDVQSQVTLNLPSGKLYT
KVAILMTLINPLAKYALLAAPITAAIEEKFSVPCGSGPARVAISTVVVVSTAVVASTVPF
FGYLMSFIGSFLSVMATVIFPSLCFLKIYKAKGIRRIEIAAITGILIIGVFVAVTGTYTS
VRQIIGTF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagaacgctcgcgccgcggtgctgccagtgagcacgctcaccgagccgctc
ctgcccggaaaaggcgaggacctcgaggcggcgcagctcccgtcctacggcggcgcgtcc
ttctcccggacgtgcctcaacctcaccaacgccgtgtccgggatcggcgtcctctccatg
ccgtacgcggtggcgcagggcgggtggctcagcctcgcgctcttcgccctcgtcggcgcc
atctgctactacaccggcacgctcatcgagcgctgcatgcgcgccgaccccgccgccgtc
gccagctaccccgacatcggcgccttcgccttcgggtccgccggccggagggccgtcgcc
gccttcatgtacgtcgagctctacctcgtcgccatcagcttcctcgtcctcgagggcgac
aacctcgacaagctcttctccggcgccaccgtggacctcctcggctaccggctgcaaggg
aagcagctgttcatcgcgctcgccgcctccgtcgtgctgcccaccacatggctcaagaac
ctcggcgtgctcgcctacgtgtcggcggtcgggctcgtctcgtcggcggtcctcacggtg
tcgctggtctgggccggcctcgccggaaccgggttccaccggaacagcaccagcgtcctc
aacctgagcggcctgccgacctcgctgggcctctacttcgtctgcttcaccggccacgcc
gtcttcccgacgatctactcctccatgaggaacaacaagcacttctccaaggtgctgctc
atctcctccgtgctctgcagcgtcaactacggactcacagcgatgctgggctacatgatc
tacggcgacgacgtgcagtcgcaggtcacgctgaacctgccctcgggaaagctctacacc
aaggtcgccatcctgatgacgctgatcaacccgctggccaagtacgcgctgctggcggca
ccaataacggcggcgatcgaggaaaagttctcggtgccgtgcggcagcgggccggcgagg
gtggccatcagcaccgtggtggttgtcagcacggcggtggtggcctcgacggtgccgttc
ttcggctacctcatgtcgttcatcggatcgttcctcagcgtcatggcgacagtcatattc
cccagcctctgcttccttaagatctacaaggccaaggggattcgccgcatcgagatcgcg
gcgatcaccggcatcctgatcatcggagtgttcgtagccgtcaccggcacctacacttcc
gtgcggcaaattataggcactttctaa
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