Panicum virgatum (switchgrass): 120707303
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Entry
120707303 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1-like
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120707303
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120707303
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
120707303
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GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
120707303
NCBI-ProteinID:
XP_039848116
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Position
5K:38158058..38159235
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AA seq
266 aa
AA seq
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MAAAATMALTSCALSGKPAASARDVFGEGRITMRKTAAKPKPAAASGSPWYGPDRVLYLG
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG
PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
ENLADHLADPVNNNAWAYATNFVPGK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccaccatggccctgacctcctgcgcgctctccggcaagccggcggcc
agcgccagggacgtcttcggcgagggccgcatcacgatgcgcaagaccgcggcgaagccc
aagccggcggcggcgtccggcagcccctggtacgggcccgaccgcgtgctgtacctgggc
ccgctctccggcgagcccccgagttatctgaccggcgagttccccggcgactacgggtgg
gacaccgcgggtctgtccgccgacccggagaccttcgccaagaaccgcgagctggaggtg
atccactgccggtgggcgatgctgggcgcgctggggtgcgtgttcccggagctcctcgcc
cgcaacggcgtcaagttcggcgaggcggtgtggttcaaggcggggtcgcagatcttcagc
gagggcgggctggactacctgggcaaccctagcctggtgcacgcgcagagcatcctggcc
atctgggcgtgccaggtggtgctcatgggcgccgtcgaggggtaccgcgtcgccggcggc
ccgctcggggaggtggtggacccgctgtacccgggcgggagcttcgacccgctggggctt
gccgacgacccggaggcgttcgcggagctcaaggtgaaggagatcaagaacggccgcctc
gccatgttctccatgttcggcttcttcgtgcaggccatcgtcaccggcaagggcccgctc
gagaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacc
aacttcgtccccggcaagtga
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