KEGG   Panicum virgatum (switchgrass): 120707306
Entry
120707306         CDS       T07260                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2-like
  KO
K12195  charged multivesicular body protein 6
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03250  Viral life cycle - HIV-1
pvir04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120707306
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120707306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120707306
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120707306
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    120707306
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120707306
  Exosomal proteins of other body fluids (saliva and urine)
   120707306
SSDB
Motif
Pfam: Snf7 TINF2_N DUF5069
Other DBs
NCBI-GeneID: 120707306
NCBI-ProteinID: XP_039848120
LinkDB
Position
1K:complement(39818263..39821697)
AA seq 229 aa
MGNIFVKKPKITDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKRDRALI
ALKKKKAQEELLKQVDTWQMNVEQQLTDIELASKQKAVFESLKAGNAALKSIQNEINIDD
VQKLMDDTAEAKAYQDEINAVLGEQLSAEDEEAVMAEFENLEAQLAVESLPDAPVTEVRP
EEKMKAPADTEAASEDIDEVIELPDVPTKVPERPEAPEKTKVLEEPLPA
NT seq 690 nt   +upstreamnt  +downstreamnt
atggggaacatcttcgtgaagaagcccaagatcacggacgtcgacagggccatcctcacc
ctcaagacgcagcgccgcaagctcgcccagttccagcagcagcttgagaaggtaatcgaa
gcagaaaaggaagctgcacggcagttggttcaacagaagaagagggacagagctttgatt
gctctgaagaagaagaaagctcaggaggagctgttgaaacaagttgacacatggcaaatg
aatgttgaacaacagctgacagacattgaactagcaagtaaacaaaaggctgtatttgaa
agcctgaaggctggaaatgctgcccttaagtctatacagaatgaaataaacattgatgat
gtccagaagctgatggatgatacagccgaggctaaggcttatcaagatgaaataaatgct
gttctaggcgagcagctatcggctgaggatgaagaagctgttatggctgagtttgagaat
ttggaagctcagcttgccgtcgagtctttgccagacgcacctgttactgaagtacggcct
gaagagaaaatgaaagcaccggctgacacagaagctgcatctgaggacattgatgaggtt
attgagcttcctgatgtgcctacgaaagtgccggagagaccagaagctcctgaaaaaacg
aaagttttggaagagccgctacctgcatag

DBGET integrated database retrieval system