Panicum virgatum (switchgrass): 120707364
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Entry
120707364 CDS
T07260
Name
(RefSeq) ABC transporter G family member 36-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120707364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120707364
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120707364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
ABC_trans_N
AAA_29
AAA_16
AAA
Rad17
AAA_22
AAA_30
AAA_33
AAA_18
RsgA_GTPase
AAA_23
DO-GTPase1
AAA_28
ABC2_membrane_3
nSTAND3
NACHT
RNA_helicase
AAA_11
Zeta_toxin
AAA_5
AAA_19
NTPase_1
T2SSE
Motif
Other DBs
NCBI-GeneID:
120707364
NCBI-ProteinID:
XP_039848191
LinkDB
All DBs
Position
5K:complement(38671257..38680414)
Genome browser
AA seq
1449 aa
AA seq
DB search
MDAGGDIQKAMSMRRGDSGSFWRRGEDVFSRSSREEDDEEALRWAALEKLPTYDRVRRAL
VPSDLGLDDGAEAGGGRGLVDVDVLSLGPQQRRALLERVVRIADEDNERFLLKLKDRIER
VGIDMPTIEVRFHNLEAEAEVRVGSSGLPTVLNSIVNTIEEAANALHLLPSRKRPMPILH
DVSGIIKPRRLTLLLGPPGSGKTTFLLALAGRLDKSLKTKGKVTYNGHEMTEFVPERTAA
YISQHDLHIGEMTVRETLAFSARCQGVGSRFDMLTELSRREKAANIKPDADIDAFMKASA
MGGQEANVVTDYILKILGLDICADTMVGDEMLRGISGGQRKRVTTGEMLVGPSRALFMDE
ISTGLDSSTTFQIVNSLRQSIHILAGTAVISLLQPAPETYNLFDDIILLSDGQVVYQGPR
EDVLEFFESMGFRCPERKGVADFLQEVTSKKDQKQYWARRDEPYRFVPVKEFATAFKSFH
TGRAIANELAVPFDKSKSHPAALTTTRYGVSGKELLKANIDREFLLMKRNSFVYIFRTFQ
LMVVSIIAMTLFFRTKMKHDTVADGGIYAGALFFGVLMIMFNGFTEMALTVFKLPVFFKQ
RDLLFFPAWAYTIPSWILKIPITFIEVGGYVFMTYYVIGFDPNVSRFFKHYLLLLAINQM
SAAIFRFIGGIARNMIVANVFASFMLLVFMVLGGFILVREKIKKWWIWGYWISPMMYAQN
AITVNEMLGHSWDKILDSTTSNETLGVQALKARGIFPEAKWYWIGFAAMIGYIFLFNALF
TLALTYLKPYGNSRPSISEEELNEKHASMNGGVPDGNHLASKSSHQSTGINTDADSTLTE
KGMILPFVPLSLTFDNIRYSVDMPQEMKAQGIQEDRLELLKGVSGSFRPGVLTALMGISG
AGKTTLMDVLAGRKTGGYIEGDISISGYPKRQETFARISGYCEQNDIHSPQVTVYESLLF
SAWLRLPEDVDSNKRKLFIEEVMELVELKQLRHALVGLPGVNGLSTEQRKRLTIAVELVA
NPSIIFMDEPTSGLDARAAAIVMRAVRNTVNTGRTVVCTIHQPSIDIFEAFDDLFLMKRG
GEEIYAGPLGHHSSELIKYLEGIQGVSKIKDGYNPATWMLEVTTAAQEHVLGVDFSDIYK
KSELYQRNKALIKELSQPAPGSSDLYFPTKYPRSSITQCIACLWKMNLSYWRSPPYNTVR
FFFTTIIALLLGTIFWDLGGKVRTSQDLMNAMGSMYAAVLFIGVMNCTSVQPMVAVERTV
FYRERAAGMYSAFPYAFGQIVIELPYALAQDVVYGLIVYSMIGFEWTVAKFFWYLFFGYF
TLLYFTFYGMMAVGITPNAHIAAIISSAFYAIWNLFSGFIVPRPKVPIWWRWYCWVCPVA
WTLYGLVVSQFGDVTTEMDDGTTVKAFIEDYFDFKHSWLGLVAAVVVGFTVLFGSLFGFA
IMKLNFQKR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcggggacatccagaaggcgatgagcatgcggcgcggggacagcggctcc
ttctggcgccgcggggaggacgtcttctcgcgctcgtccagggaggaggacgacgaggag
gccctgcgctgggccgcgctcgagaagctccccacctacgaccgcgtccgccgcgccctc
gtgcccagcgacctcggcctcgacgacggcgccgaggcgggcggcgggagggggctcgtc
gacgtcgacgtgctcagcctcggcccgcagcagcgccgggcgctgctggagcgcgtcgtg
cgcatcgccgacgaggacaacgagcgattcctgctcaagctcaaggaccgcatcgagagg
gtcgggatcgacatgcccaccatcgaggtgcggttccacaacctggaggcggaggcggag
gtgcgcgtcgggagcagcggcctccccaccgtcctcaactccatcgtcaacacgatcgag
gaagcggcgaacgcgctgcacctgctgcccagcaggaagaggcccatgcccatcctccac
gatgtcagtggcatcatcaagcctcgcaggttgactcttctgttaggcccacccggctca
ggcaagactacttttctgctcgcgttggcgggaaggcttgacaaaagcctcaagactaaa
ggcaaggtgacatacaacggccatgagatgacggagtttgttccagagaggacggctgcg
tatatcagccagcatgacctccacataggagagatgactgtgagggagacactcgcattc
tccgcgcgctgccagggtgttggttcacgctttgatatgctgactgagctgtcaaggaga
gagaaggcggcgaatatcaagcctgatgctgatattgatgcgttcatgaaggcatctgca
atgggcgggcaagaagccaatgtggtcaccgattatattctgaagatattaggactagac
atatgcgcagatacgatggtaggggatgagatgctcaggggcatatccggtggacagaga
aagcgtgttacaactggtgagatgctggttgggccttccagggcacttttcatggatgaa
atctcgactgggcttgacagctccactacattccagattgtgaactcgctcaggcagtcc
atccacatcctcgctggcactgccgtcatctccctcctgcagccggcgcctgagacttat
aacttgtttgatgacatcatactcctctcagatggccaagttgtctaccagggcccccga
gaagatgtgcttgagttttttgagtccatgggtttcagatgccctgaaaggaagggtgtt
gctgacttcttgcaagaagtgacttcgaaaaaagaccagaaacagtactgggcgcggcgt
gatgagccttataggtttgtgccggtgaaggagtttgcaactgcattcaagtcattccac
acagggagagctatagcaaatgagcttgctgttccatttgacaagagcaagagccaccca
gccgcactaaccaccacgaggtatggcgtgagtggcaaggagctgttgaaagcaaacata
gatcgggagttccttctcatgaagaggaactctttcgtttacatattcagaaccttccag
ctgatggtggtgtcaatcattgcaatgactctattcttccgtacgaagatgaagcatgac
acggtagctgatggggggatctacgcgggcgcactcttctttggtgtgcttatgatcatg
ttcaatggcttcactgagatggcactcactgtcttcaagctgcctgtattcttcaagcag
agggacctccttttctttccagcatgggcctacactataccctcatggatccttaagata
cccatcacattcatcgaggttggtggttatgtattcatgacatactatgtcattgggttc
gacccaaatgttagcaggttcttcaagcactatctccttcttttggcaatcaatcagatg
tcagcagctatcttccgatttattggtggcatagcgaggaacatgattgttgctaatgtc
ttcgcttcattcatgttgctggttttcatggtgctaggaggatttattctagtaagagag
aaaataaagaaatggtggatctgggggtactggatctccccaatgatgtatgcgcagaat
gccattacagtgaatgagatgttggggcacagctgggacaaaatattggatagcactacc
tccaacgagaccctaggtgtgcaagccctaaaagcccgtggaatattccccgaagccaag
tggtactggattggctttgctgcaatgattgggtatatctttctgttcaacgctctcttc
actcttgcccttacataccttaagccatatgggaactctcgaccatcaatctctgaagag
gagctgaatgagaagcatgccagcatgaacggtggggttccagacggcaatcacttggca
tcaaaaagctctcatcaatcaacaggaatcaacactgacgctgattctaccctgactgaa
aaggggatgatcctcccatttgtcccgctttcactcacctttgataacatcagatactct
gttgacatgccacaggaaatgaaagcacaaggtatacaagaagatcgtctcgagctcctc
aaaggtgtcagtgggtcttttaggcctggggtgctaactgcactgatgggaatcagtggc
gcagggaaaaccactttgatggatgtgttggcagggagaaagaccggtgggtacattgaa
ggagatatcagtatttcaggatacccgaagagacaagagacgtttgcacgcatatcagga
tactgtgaacagaatgatatccactcgccgcaggtaacagtctacgaatcactgcttttc
tcagcatggctgcggcttccggaggatgtagattcaaacaaaagaaagctcttcattgag
gaagtgatggagcttgtggagctgaaacagttgagacatgctttggttggacttcctgga
gtgaatggcctgtcaacagagcagaggaaaagactcaccattgctgtggaactcgtggca
aatccatcgatcatcttcatggatgagccaacctcaggacttgatgcccgagcagctgca
attgttatgcgtgcggtgaggaacactgtcaacactggtaggacagtggtctgcacgata
catcaacctagcattgacatatttgaagcattcgatgatcttttcctgatgaagcgtggt
ggagaagagatctatgctggtccactaggccatcattcttcagagctgatcaagtattta
gaggggattcaaggtgtcagcaaaattaaagatggctacaatccagcaacatggatgctg
gaagtgacaacagcagctcaagaacacgtgctaggtgttgatttcagtgacatatacaag
aaatctgaactgtaccagaggaacaaggccttgataaaggaattaagccaacctgcgcca
ggttcaagtgacctgtatttccctaccaagtatccgcgctcgtccatcacacaatgcata
gcttgcctgtggaagatgaacctgtcatactggaggagccctccatacaataccgttagg
ttctttttcacaaccataattgctctcctcctaggcaccatcttctgggatcttggcggc
aaagtgaggacgtcacaagacttgatgaacgccatgggatcaatgtacgctgcggtgctg
tttattggggtcatgaattgtacctcagttcagccgatggtggccgtggagcggactgtc
ttttaccgtgaaagagctgcgggcatgtactctgctttcccctatgcatttggacagatt
gtcatcgagctcccgtacgcactggctcaggatgtcgtgtatgggctgatagtgtactca
atgatcgggttcgagtggacggttgccaagttcttctggtacctcttcttcgggtacttc
acgctgctctacttcacattctacggcatgatggccgtcggcataaccccaaacgctcac
atcgccgcgatcatctcctcggcgttctacgccatctggaacctcttctctgggttcatc
gtcccgcgaccgaaagtgccgatctggtggaggtggtactgctgggtatgccccgtggcg
tggacgctgtacgggctggtcgtgtcgcagttcggcgacgtgacgacggagatggacgac
ggcacgaccgtgaaggcgttcattgaggactacttcgacttcaagcacagctggctgggg
ttggtggccgccgtggtcgtggggttcacggtgctgtttggctccctcttcggctttgcc
atcatgaagctcaacttccagaagagatga
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