Panicum virgatum (switchgrass): 120707415
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Entry
120707415 CDS
T07260
Name
(RefSeq) zinc finger CCCH domain-containing protein 8-like isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
120707415
NCBI-ProteinID:
XP_039848243
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Position
5K:complement(39323002..39332007)
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AA seq
525 aa
AA seq
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MSDPLYPFSRGALPGGDGKPPPPRYSDFEVDLIAARYASSPPPPPYPSAADASAFDSHVG
AFDSHIGAFDSHVGAFDSHIGAFDLYVGAGRYAGALYHQSFMGSHSTVGQNEALYSSNTM
AKRPRLESSLPMYPQRPGKKDCAFYMRTRTCNYGETCKFDHPQWVPEGGVPNWKEVPEDS
YPERPGEPDCPYFVKSNSCRFKSKCKFNHPKEKVNALCAGTDNGQSLIADSAILPVRPSE
PVCSFYVKTGKCKFGAKCKFNHPKDVEIAPVIAKETIYTATTDAAAHIGTADSSVQAKAH
APTAPAEAHNAKGFPIRPGEVDCLFYMKTGSCKYGSICRFNHPYRPVVDVALMDPLVQDT
LPTPAPIDSAAVLNPAANIMQCFDFYATHVPIEPLPIMYPQRPGETVCDFYMKTGSCKYS
QKCKFHHPINRSVHDANENEDPQQPVTLTLAGLPRREDAEICAFYMRSGTCRYGVLCKFD
HPPLQEAIAKLQAGGKEGEKEEGEEKEGVEKKGVEEKEGLSVVLR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccccctctacccgttctcccgcggcgctctccctggcggcgacggcaagccg
ccgccgccgcggtactcggattttgaggtcgacctcatcgcggcccgctacgcctcttcc
ccgccgcctccgccgtacccctccgccgccgacgccagcgccttcgactcgcacgtcggc
gctttcgactcgcacatcggcgccttcgactcgcacgtcggcgccttcgactcgcacatc
ggcgccttcgacttgtacgtcggtgcggggcgatacgcgggagctctctatcaccaatct
tttatgggaagtcatagtactgttggccagaatgaggctttatattcatcaaatactatg
gctaaacgccctaggcttgaaagcagccttcctatgtatccacaacgaccggggaaaaag
gactgtgccttctatatgaggaccagaacctgtaattatggagagacctgcaaatttgac
catccacaatgggttccagagggtggggttccaaactggaaagaggtccctgaagattct
tatcctgagcgaccaggggaaccagattgtccttattttgtgaagtctaatagctgtaga
tttaaatctaaatgcaagttcaaccatccaaaggaaaaggtgaatgcattatgtgctgga
acggacaacggacagtctctaattgctgatagcgccatcttaccagtgaggccttctgaa
cctgtttgttccttctatgtaaaaacaggaaaatgcaaatttggtgcaaaatgcaagttc
aatcatcccaaagatgttgagatagcacctgtgattgcaaaggaaaccatatatacagca
acaactgatgcagcagcacacattggtacagcagatagttcagttcaagcaaaggcgcat
gcaccaactgccccagctgaggcacataacgcaaaggggtttcctataagaccaggtgaa
gttgattgcttgttttatatgaagacaggcagctgcaaatatggttctatttgtcgcttc
aaccatccttatcggccagttgtggatgtagcattgatggatccactggttcaagatact
cttcctactccagctcccattgactctgcggcggtgttaaatccagctgcaaatattatg
caatgctttgatttttatgcgactcatgtgcctattgaacctctgccaataatgtatcct
cagaggcctggagaaactgtttgtgatttttacatgaagacaggatcttgcaagtattct
cagaagtgcaagtttcaccatcctatcaaccgctctgtacatgatgccaatgaaaacgag
gatcctcagcagcctgtgacgcttactcttgctggccttccaaggagagaggacgctgag
atctgtgccttctacatgaggtctggcacgtgcaggtatggcgtgctctgcaagttcgac
caccctcccctacaggaggctatcgccaagctgcaggcaggcggaaaggaaggtgagaag
gaggaaggtgaggagaaggaaggtgtggagaagaaaggtgtggaggagaaggaagggttg
agcgtcgtcctgcgctag
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