Panicum virgatum (switchgrass): 120707441
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Entry
120707441 CDS
T07260
Name
(RefSeq) chitinase domain-containing protein 1-like
KO
K17525
chitinase domain-containing protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120707441
Lectins [BR:
pvir04091
]
Chitinase-like lectins
120707441
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GFIT
Motif
Pfam:
Glyco_hydro_18
DotU
Motif
Other DBs
NCBI-GeneID:
120707441
NCBI-ProteinID:
XP_039848281
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Position
5K:39604780..39608952
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AA seq
432 aa
AA seq
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MPPRRRDRRRPRDPSPPPPSDARAPPPSASGIRITLLAPAVVLVLVLTVLGFSGRLSRSP
PHPQTLQTTARSVYERGLVKRDISSREILAEHTRVSEKRSQRQFPNPVLAYVTPWNSKGY
DMAKLFSAKLTHISPVWYDLKSDRNMLVLEGEHNFDATWVSELQGNGSLVVPRVVLEAFP
AVILLEKMQKAKAIDLIVSECRDKGYDGIVLESWSRWAVYGVLDDPELRYMALQFVKQLG
EALHSISSKSSNRHLELIYVIPAPRMKELSNQDFGPEDLLQLADSLDGFSLMTYDFSGPQ
NPGPSAPLKWVQHSLTTLLSAKGSSPSGNHSRMIFLGINFYGNDFLLSRGSGGGAITGRD
FVHLLEKYKPSLQWDEKSLEHFFIYSHEGVRHAVFFPTLMSLSVRLDEARNWGTGLSIWE
IGQGLDFFFDVL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcggaggcgagatcgccggagaccccgcgacccgtcgccgccgccgccctcc
gatgcaagggcaccaccaccctccgcctcaggcatccgtatcaccctccttgcccctgcc
gtcgttctggttctcgtgctcaccgtgcttggcttctccggccgcctctctcggtcccct
ccccacccccagacgctgcagaccaccgcccgctccgtctacgagcgcggcctcgtcaag
cgcgacatctcctcacgcgagatcctcgctgagcacacaagggtttccgagaagcggtcg
cagcgccagttcccgaaccctgtcctcgcctacgtgacaccctggaactccaaaggttat
gacatggcaaaattgttcagtgcaaagcttactcacatatcaccagtgtggtatgatttg
aagagtgataggaacatgttagttctagaaggagagcataattttgatgccacatgggtc
tctgaacttcaaggcaatgggtccctggtagtaccaagagttgtcttagaagcatttcct
gctgttatactattggaaaagatgcaaaaagcaaaagctattgatctaatagtgagtgaa
tgcagggataagggctatgacggtattgtgctagaatcctggtcaagatgggctgtttat
ggtgtgctggatgatccagagctacgttacatggcacttcaatttgttaagcagctgggg
gaggctttgcattcaatcagctctaaatcaagtaaccgccatttggaactaatttatgtt
atcccagctccaagaatgaaagagctcagtaatcaggactttggaccagaagatctcctg
caattggctgactcattagatggtttttctcttatgacatatgacttctcagggcctcaa
aatcctggtcccagtgcacctctcaagtgggtacagcattctttaacaacactcctttca
gccaaaggttcttcgccttctggtaaccattctcggatgatattccttggcatcaatttt
tacgggaatgattttctactgtctagaggcagcggtggtggtgctatcactgggagagat
tttgttcatttgctcgagaagtacaagccatctttgcagtgggatgagaaaagtttagag
cactttttcatctattcgcatgaaggtgtgaggcatgctgtatttttcccaacactgatg
tctctttctgtacgtttggatgaagcgcgaaattggggaacaggtctttcaatttgggag
attggacaaggtttggacttcttttttgatgttctatag
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