Panicum virgatum (switchgrass): 120707461
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Entry
120707461 CDS
T07260
Name
(RefSeq) uroporphyrinogen decarboxylase 1, chloroplastic-like
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00860
Porphyrin metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
120707461
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
120707461
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Motif
Pfam:
URO-D
Motif
Other DBs
NCBI-GeneID:
120707461
NCBI-ProteinID:
XP_039848298
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Position
5K:complement(39786141..39797265)
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AA seq
402 aa
AA seq
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MMSPTVTATAVFLSAAPSSSSTRRRRSRLAAISASLSPSSSSSEEPLLVRAARGEDGLPR
PPAWMMRQAGRYMAEYQALAKRHPSFRERSEKTDLIVEITLQPWRAFAPDGVILFSDILT
PLPAIGVPFDISDSKGPVIQSPVRSEDQVRQLVPIDLDKLHFVGESLRILRNEIDGKAAL
LGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRGLLSHLAQAISDYIIYQVNSGA
QCVQIFDSWGGQLPPHVWEQWSKPYIKQIVSRIKKECPHVPLVLYINGNGGLLERMKDTG
VDVIGLDWTVDMADGRRRLGNGIGVQGNVDPAFLFSPLPVLTDEIHRVVKSAGPKGHILN
LGHGVLQKTPEEAVAHFFDVTRSLRYDTLFQGSVAGELQAVA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctccgacggtcaccgcaacggccgtcttcctctccgcggcgccctcctcctcc
tccacccgtcggcgccgcagccggctcgccgccatctccgcatccctctcgccgtcctcc
tcctcctccgaggagccgttgctggtgcgcgcggcgcggggcgaggatggcctgccgcgc
ccgccggcctggatgatgcggcaggcggggcggtacatggcggagtaccaggcgctggcc
aagcgccacccctcgttccgggagcggtccgagaagacggacctcatcgtcgagatcact
ctgcagccctggcgcgccttcgcgcccgacggcgtcatcctgttctcggacatactcacg
ccgctgccggcaatcggggtgccgttcgatatctccgattccaagggcccggtgatccaa
tcgcccgtgcggtccgaggaccaggtcaggcagctcgtacccatcgacctcgataagctc
catttcgttggggagtcgctcaggattctgcgaaatgagattgatggaaaagctgctttg
ctaggatttgtgggggccccatggacaattgcaacttatgttgttgaaggggggatgacc
aacacatacacaaatataaagagcatgtgccatactgctccaaatgttttgaggggcctt
ctctcacaccttgcacaagcaatatctgactatatcatttaccaagtaaactctggggct
caatgtgtacagatatttgattcatggggtggacaacttccacctcatgtgtgggagcag
tggtcaaaaccatatatcaaacagattgtgagtaggattaagaaagagtgccctcatgta
ccccttgtgttgtatataaatgggaatggaggtttacttgagcgaatgaaggatacagga
gttgatgttattgggcttgactggacagtggacatggctgatggaaggaggcgccttggt
aatggaattggtgtacaagggaatgtggatccagcatttctattttcaccattaccagta
ttgactgatgaaattcatagggttgtgaaatcagctggtccaaaaggtcatattcttaac
ttgggccacggggtgctacagaaaacacctgaagaagctgtagcacatttctttgatgtc
actaggagcttgagatatgacacccttttccaaggttcagttgctggagaattgcaggct
gttgcatga
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