Panicum virgatum (switchgrass): 120707467
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Entry
120707467 CDS
T07260
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 6-like
KO
K03037
26S proteasome regulatory subunit N7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120707467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120707467
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120707467
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
RPN7_PSMD6_C
DUF2461
HAAS_TM
Motif
Other DBs
NCBI-GeneID:
120707467
NCBI-ProteinID:
XP_039848307
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Position
1K:39997313..40000348
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AA seq
389 aa
AA seq
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MDGGAGEEGKQERHLVLAHKLFLLSHPAVDDLSKVALRAEVLDAVKSDDMAPLFESLVAA
GVLEPDAALLAEMRGRIDEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKA
LEQLKVTEGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKNLFEEGGDWERKNRL
KVYEGLYCMATRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSVITLDRVSLKQKV
VDAPEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLTEQIKLDRYLQPHFRYYMREVR
TVVYSQFLESYKSVTMEAMAAAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPD
ERNAFYQATIKQGDFLLNRIQKLSRVIDL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggcgccggcgaggaggggaagcaggagcggcacctggtgctggcccacaag
ctcttccttctctcccaccccgctgtcgacgacctctccaaggtcgccctccgcgccgag
gtcctcgacgccgtgaaatccgacgacatggcgccgctgttcgagtcgctggtcgccgcg
ggcgtgctggagccggacgccgcgctgctggccgagatgcgtgggaggatcgacgaggag
atccgcaagctcgacgagaaaattgctgatgctgaggagaatttgggtgagagtgaagta
cgtgaagcccatcttgccaaatccttgtactttataagggttggtgagaaggaaaaggct
ctggaacaactcaaagttactgaaggaaagactgtagctgttggccaaaagatggatctt
gtgtttcacactttgcagattggatttttctacatggattttgatctcatctcaaaatcc
attgataaggcaaagaacttgtttgaggaaggaggtgactgggagaggaagaacagattg
aaagtatatgaaggcttgtactgcatggcaaccagaaacttcaagaaagctgccagctta
tttttagattccatttcgactttcacaacttatgagttattcccatatgatacatttatc
ttttatacagtcctcactagtgttatcacactggatcgtgtatccctgaaacaaaaggtg
gtagatgcgccagaaatcctggccgtgatcggcaaagtacctcacctctctgagttcctc
aattccctatacaattgccagtacaagtcgttttttgttgcattctctggcttgacagag
cagatcaagttagaccgttatcttcagcctcatttccgctactacatgcgggaagtgcgt
actgttgtctactcacaattcttggagtcgtacaagagtgtaacaatggaagcaatggct
gctgcttttggtgtgactgttgatttcatagaccaggaactgtcacggttcattgcagct
gggaagcttcactgcaagattgataaggttgctggcgttcttgagacgaaccgaccagat
gagaggaacgctttctaccaggcgaccatcaagcaaggggacttcttgctgaaccgcata
cagaagctttcacgagtcattgacctgtaa
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