Panicum virgatum (switchgrass): 120707570
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Entry
120707570 CDS
T07260
Name
(RefSeq) auxin response factor 2-like isoform X1
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120707570
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GFIT
Motif
Pfam:
Auxin_resp
B3
Motif
Other DBs
NCBI-GeneID:
120707570
NCBI-ProteinID:
XP_039848417
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Position
5K:complement(43353692..43359248)
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AA seq
709 aa
AA seq
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MAGIDLNTVEGEEDEEEAPPAERAGGAVCLDLWHACAGPVAPLPRKGSAVVYLPQGHLEH
VGADAAPPAAVPPHVFCRVVDVNLHADGATDEVYARVSLLPEDEEAERRARARPREDEDA
ARDGEGAPKPLARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVA
KDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLRVRRAA
QLKNVNLIPALHNQCSNHRNLGNVTQAVALRTVFHICYNPRLSQSEFIVPYWKFMRSFNQ
PFSVGMRCRMRYESDDASERRCTGIIIGSREAEPMWHGSKWKSLVVRWDDDIECRRSNRV
SPWEIELTGSVSGSQSHLCAPNSKRLKPCLPQVNTEIMLPYGSVSSDFAGSARFHKVLQG
QEFLGFKTHDDTAISASQATEARNLQYSDEHSSSINKSNNILGVPRFGVRSPTGTPGFPY
HCSGFGESQRFQKVLQGQEVFRPFRGDLADVHIRTAGMYQPDCMHATGAAYKWPTPQGCD
FRQRTKPVLLQASSPSSVLMFSQTSSKVPHLEYEYSCLDKDEDGRNDRAVPTQDMGRSNQ
ALSLWPHLVSGEAIDECTGTEKMHSPVSDAEHESNNESTVENGCKIFGISLAEQVRSCDE
ADSCNANCNSRLQPSQPQISKSLSSCWATVHEQRPVVGRVVDVSLVDMV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgacctcaacaccgtcgagggggaggaggacgaggaggaggcgccgccg
gcggagagggcgggcggcgcggtgtgcctggacctgtggcacgcgtgcgcggggcccgtc
gcgccgctgccgcggaagggcagcgccgtcgtgtacctgccgcagggccacctcgagcac
gtcggcgccgacgcggcgccgcctgcggcggtgccgccgcacgtcttctgccgcgtcgtc
gacgtcaacctccacgcggacggcgcgacggacgaggtgtacgcgcgggtgtcgctgctg
cccgaggacgaggaggcggagaggcgtgcgcgtgcgcggccgcgggaggacgaggacgcg
gctcgcgacggcgagggcgccccgaagccgctcgcgcggacgccgcacatgttctgcaag
acgctcacggcctccgacaccagcacgcacggcggcttctccgtgccgcgccgcgccgcc
gaggactgcttcccgccgctggactacagcctgcagaggccgtctcaggagctcgtggcc
aaggatctgcacggcacggagtggaagttccgtcatatctatcgaggccaaccacgaagg
catctcttaaccactggatggagcgcatttgttaataagaagaagctggtctctggagat
gctgttctattccttcgtggtgaagatggagtgcttcgattgagagttcgccgagcagca
cagcttaaaaacgtaaatcttattcctgcgctgcataaccagtgctccaatcataggaat
ctgggaaatgtcacacaagctgtggccttgaggactgtttttcacatctgctacaatccc
aggctaagccaatctgaattcattgtaccctattggaagttcatgagaagcttcaatcaa
ccattttctgttggaatgagatgcagaatgaggtatgaaagcgacgatgcttctgaaaga
aggtgcactgggataataattggaagcagagaggcagagcctatgtggcatggttcaaaa
tggaaatccttggtggtcagatgggatgatgatatagagtgccgtcggtccaatagggtt
tctccttgggagattgagcttacaggatcagtttcaggatctcaatcccatctgtgcgct
ccaaattcaaaacgtctgaaaccatgcctcccccaagttaacacggagatcatgcttcca
tatggaagcgtttcttcagattttgcgggatctgccagattccacaaggtcttgcaaggt
caagaatttttgggtttcaaaacccatgatgatactgctatttcagcttcgcaggcaact
gaagcaagaaatttgcagtatagtgatgaacatagtagctctatcaacaagagtaacaat
atcttaggggttccaagatttggtgttagatctccaactggaacccctgggtttccctac
cattgctcaggctttggagaatcacaaagattccaaaaggtcttgcaaggtcaagaagtg
tttcgtcctttccgaggagatttggctgatgtccatataaggactgctggcatgtatcaa
cctgactgtatgcatgcaactggtgcagcttataaatggcctacaccgcaagggtgtgac
tttcgacagcgaacaaaaccagttctgttgcaagcatcctccccatcatctgtgctgatg
ttttcacaaactagttctaaggtacctcacttggagtatgagtacagctgcctggataag
gatgaggatggtagaaatgatagggctgtccctactcaagacatgggaagaagcaaccaa
gcattatccctttggcctcatcttgtttcaggcgaagccatagatgaatgtactggaact
gagaagatgcactcccctgtcagtgatgcagagcatgaatcaaacaatgagagtaccgtt
gaaaatggctgcaaaatctttggtatctcattggctgaacaggtccgatcatgtgatgaa
gcagactcttgcaatgcaaattgtaattctcggctccagccttcacagccacaaatatca
aaatcactaagcagctgttgggccactgttcatgagcaaaggcctgttgttggcagggtg
gttgatgtctcgctggtggatatggtttga
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